Pseudomonas hygromyciniae: JTY93_17655
Help
Entry
JTY93_17655 CDS
T09404
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JTY93_17655 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_17655 (uvrB)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JTY93_17655 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JTY93_17655 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
QSB38100
UniProt:
A0ABX7JSL0
LinkDB
All DBs
Position
complement(3981932..3983947)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAMEGIKAELAERLEYLRANNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPQ
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccaactagtcacccgctttgaacctgctggcgaccagcccgaggccatt
cgcctgatggtcgaaggcatcgaggccggcctggcgcaccagacgctgctcggggtgacc
ggttcgggcaagaccttcagcatcgccaacgtgatcgcacagatcaaccgcccaaccctg
gtgctggcgccgaacaagaccctggccgcgcagttgtacggtgagttcaaggcgtttttc
ccgaacaacgcggtggagtacttcgtttcctactacgactactaccagcccgaagcctat
gtgccgtcttccgatacctttatcgagaaggatgcgtcgatcaacgaccatatcgagcag
atgcggctgtcggcgaccaaagcgctgctggagcgcaaggacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagcccggaaacttatctgaagatggtgctgcacgtc
gatcgcggcgacaaactcgaccagcgcgccttgctgcggcgcctggcggatttgcagtac
acccgcaacgacatggacttcgcccgcgcgactttccgcgtgcgtggcgatgtgatcgat
atttacccggctgaatcggacctggaagcgattcgtatcgagctgttcgatgatgaagtc
gagagcctgtcggccttcgacccgttgaccggcgaagtgatccgcaaactgccgcgcttc
accttctatccaaaaagccactacgtgaccccgcgtgaaacccttttggatgccatggaa
gggatcaaggccgagcttgccgagcgcctcgagtacctgcgcgccaacaacaaactggtg
gaagcccagcgtctggaacagcgcacgcgttttgacctggagatgatcctcgagctgggt
tactgcaacggcatcgaaaactactcgcgctacctgtcgggtcgtgagtccggtgcgccg
ccgcctaccctctacgactacctgccggcagatgcgttgctggtgatcgacgaatcccac
gttagcgttccgcaagtcggcgccatgtataaaggcgaccgctcgcgcaaggaaaccctg
gtggagtacggcttccgcctgccttcggcgctggataaccgtccgatgcgctttgacgaa
tgggaaagcatcagcccgcagaccatctttgtgtccgccacgccgggcaactacgaggcc
gagcatgctgggcgggtgatcgagcaactggtgcgccccaccggcctggtggacccgcaa
atcgaaatccgcccggccctgacccaggtcgatgacctgctgtcggaaatcaccaagcgt
gtcgccctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacctt
accgattacctggccgaccacggcgtgcgtgtacgttacctgcactcggacatcgatacc
gtggaacgtgtagagatcatccgcgacctgcgtctgggtaccttcgatgtgctggtgggg
atcaacctgctgcgtgaaggcctggacatgcccgaggtgtcgctggtggcgattctggac
gcggacaaggaagggttcctgcgctccgagcgctcgctgatccagaccatcggccgtgcg
gcgcgtaacctcaatggccgtgcgatcctgtatgccgaccgtatcaccggctccatggag
cgggccatcggcgagaccgaacgccgtcgcgagaagcagattgcgttcaacctggccaat
ggcatcactcccaagggcgtgttcaaggacgtggccgacatcatggaaggcgccaccgtg
cccggttcgcgcagcaagaagcgcaagggcatggccaaggctgccgaagaaaacgccaag
tacgaaaacgaactgcgctcgccgagtgaaatcaccaaacggatccgccagttggaagag
aaaatgtaccagttggcgcgggatctggagtttgaagcggcggcgcagatgcgcgatgag
attggcaagttgcgtgagcggttgctgactgtctga
DBGET
integrated database retrieval system
