Pseudomonas hygromyciniae: JTY93_18150
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Entry
JTY93_18150 CDS
T09404
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00071
Fatty acid degradation
phyg00280
Valine, leucine and isoleucine degradation
phyg00310
Lysine degradation
phyg00362
Benzoate degradation
phyg00380
Tryptophan metabolism
phyg00410
beta-Alanine metabolism
phyg00640
Propanoate metabolism
phyg00650
Butanoate metabolism
phyg00907
Pinene, camphor and geraniol degradation
phyg00930
Caprolactam degradation
phyg01100
Metabolic pathways
phyg01110
Biosynthesis of secondary metabolites
phyg01120
Microbial metabolism in diverse environments
phyg01200
Carbon metabolism
phyg01212
Fatty acid metabolism
Module
phyg_M00087
beta-Oxidation
phyg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JTY93_18150 (fadB)
00650 Butanoate metabolism
JTY93_18150 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JTY93_18150 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JTY93_18150 (fadB)
00310 Lysine degradation
JTY93_18150 (fadB)
00380 Tryptophan metabolism
JTY93_18150 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JTY93_18150 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JTY93_18150 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JTY93_18150 (fadB)
00930 Caprolactam degradation
JTY93_18150 (fadB)
Enzymes [BR:
phyg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JTY93_18150 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JTY93_18150 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JTY93_18150 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JTY93_18150 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSB38189
LinkDB
All DBs
Position
complement(4085348..4087495)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMASSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPIVYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggctgatgcatcgatcaaaggtgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccgactgttgccgcgatcaatggcatcgctctgggcggcggtctggaa
atgtgcctggccgcggacttccgcgtcatggcctccagcgcgaaaatcggtctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgtatcatcggt
gccgacaatgccatcgaatggattgccgctggcaaggaaaaccgtgctgaagacgcgctg
aaagtaggcgcagtcgatgccgtggttgctccggaaaagctcgcagaagctgcactgaac
ctgatcaagggcgccatcagcggcgaattcgactacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaagggtttc
gtcgccggtcaagcgggtcctaactacccggctccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaaatcgaagccgccggcttcgtcaaa
ctggccaagacgtctgctgcgcagagcctgatcggcctgttcctgaacgatcaggaattg
aagaaaaaagccaaggcctacgacgaaatcgccaaagacgtgaaacaggctgccgtactg
ggcgccggtatcatgggcggcggtatcgcttatcagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgaacacggtatcgagcagggcctggcggaagccgccaaactg
ctggtgggccgcgttgataaaggtcgcatgaccgctgcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggacatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagcggtactggctgaagttgaagcccaggtcaaa
gaagacacgatcctggcgtccaacacctcgaccatttccattaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgaaaagtccagcgagttggctgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgtgtgctgttcccgtacttcggcggtttcgccaagttggtcagcgcgggtgtggac
tttgtgcgtatcgacaaggtcatggagaagttcggctggccaatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggatcgcatgaaagacgaccgtcgctcggctgtcgatgcgctttacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctatgagaccgacaagaaaggcaagcag
aagaaagttgccgatccatcggtccacgaagtgctggcacccatcgtctacgagcagcgt
gaagtgtccgacgaggacattatcaactggatgatgatcgccctgtgcctggaaaccgta
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgta
gccgaattcgttgccctggctgatcaatacgctgatctgggcccgctgtaccacccgact
gcgaagctgcgcgagatggccaagaatggccagagcttcttcggttaa
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