Pseudomonas hygromyciniae: JTY93_18340
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Entry
JTY93_18340 CDS
T09404
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03030
DNA replication
phyg03430
Mismatch repair
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JTY93_18340 (dnaX)
03430 Mismatch repair
JTY93_18340 (dnaX)
03440 Homologous recombination
JTY93_18340 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyg03032
]
JTY93_18340 (dnaX)
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_18340 (dnaX)
Enzymes [BR:
phyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JTY93_18340 (dnaX)
DNA replication proteins [BR:
phyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JTY93_18340 (dnaX)
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JTY93_18340 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
TIP49
AAA_18
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
DUF3646
AAA_7
HasA
Rad17
Mg_chelatase
SKI
zf-CXXC
Herpes_Helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QSB38222
LinkDB
All DBs
Position
complement(4127338..4129398)
Genome browser
AA seq
686 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVMLRMLAFRP
ADTADAPRQPLKPVGISQATVDSAKPVAGAAVVAPVIAPQPVAVAPAPVAVEPVVPVVAP
EPVAEPAPAPVVDLPWNEPVEAVVESAPAVEPVLETSAEQPELTPMPTPTPPPPDSVVPD
APEWVSAPVPEPTIAEVDAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHTAEPA
PEPEAEPAAMPATGLALQWLELFPKLPISGMTGSIAANCTLIAVDGDHWLLHLDPAHSAL
FNATQQRRLNDALNQFHERPLTVTIELIKPEQETPAQAATRRRLNRQREAEESIQADPLI
QQMMEQFGAVVRHDTIEPVEAQAAAG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccaacggctgcaccacgcc
tacctgttcaccggcacccgcggggtgggcaagaccaccattgcgcggatcattgccaaa
tgcctgaactgtgaaacgggcatcacttcgaccccctgcggtacctgctcggtatgccgg
gagattgacgaagggcgctttgtcgacctgatcgagatcgacgccgcgagccgcaccaag
gtcgaggacacccgcgaactgctggacaacgtgcagtacgcccccagccgcgggcgcttc
aaggtgtacctgatcgacgaagtgcacatgctctccagccattccttcaacgccctgttg
aagaccctggaggagccgccgccctacgttaagttcatccttgccaccaccgatccacag
aaacttcccgcaacgattttgtcgcggtgcctgcagttctccctgaaaaacatgaccccc
gagcgcgtggtcgagcatttgacccacgtgctcggtgtggagaacgtgccattcgaagac
gacgcgctgtggctgctgggccgcgccgccgatggctcgatgcgtgacgccatgagcctg
accgaccaggccattgcctttggtgaaggcaaggtgatggccgccgacgtgcgggccatg
ctcggcaccctcgaccacgggcaagtgtttgacgtgctgcatgcgctgatcgaaggcgat
gccaaggcgcttcttgaagcggtgcgccatctgtcggagcagggcccggactggaatggc
gtgctttcggaaattctcaacgtgctgcaccgcgtcgctatcgcccaggcgctgcctgaa
ggggtcgataacggccacggcgatcgcgaccgcgtgttggctctggcccaggcgttgcca
gccgaagatgtacagttctactaccagatgggcttgatcgggcggcgtgacctgcccttg
gcaccggacccgcgcggcgggtttgaaatggtcatgctgcgcatgctggcgtttcgcccc
gcagacaccgccgatgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgccaaaccagtggctggcgcggcggtcgtcgcgccagtgatcgcgccgcaa
cctgtggcagtcgctccagccccggtcgcggtcgagcctgtggtgccggtagtggccccg
gagccggttgccgagcctgcgccagcgccggtggtcgatctgccttggaatgagccggta
gaggccgtggtcgagtcggcacctgccgtcgagcccgtgctggaaaccagcgccgagcag
cctgagctgacgccgatgccgacgcccacccccccaccccccgacagcgtggtaccggac
gcgccggaatgggtctcggcacccgtgcccgagccaactattgccgaagtggacgccgcg
accccaggtatcgacctggatgacgagccgccgctggacgaagattacatcgagccggac
atggactcggcctacagctatttggacgacctggccagcgagcacaccgccgagcctgcg
cccgagcccgaggcggaacctgccgccatgccggccaccggcctggccctgcaatggttg
gagttgttcccgaagctgccgatctccggcatgaccgggagcatcgccgccaactgcacg
ctgattgccgtcgacggcgatcactggctgttgcacctggaccccgcccacagtgccctg
ttcaacgcaacccagcagcgccggctcaacgatgccctgaaccagttccacgaacgcccc
ctgacggtgaccatcgagctgatcaagcccgagcaggaaaccccggcccaggccgccacc
cgtcgccggctcaaccgccagcgcgaggccgaggagtcgatccaggccgatccgctcatc
cagcagatgatggagcagtttggcgcggtggtgcgacacgatactattgagcccgtcgaa
gcccaggccgcagcgggctga
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