Pseudomonas hygromyciniae: JTY93_18435
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Entry
JTY93_18435 CDS
T09404
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00550
Peptidoglycan biosynthesis
phyg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JTY93_18435 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyg01002
]
JTY93_18435 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phyg01011
]
JTY93_18435 (dacB)
Enzymes [BR:
phyg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JTY93_18435 (dacB)
Peptidases and inhibitors [BR:
phyg01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
JTY93_18435 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
phyg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JTY93_18435 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
LppX_LprAFG
DXP_synthase_N
DUF2997
Motif
Other DBs
NCBI-ProteinID:
QSB38240
LinkDB
All DBs
Position
4154368..4155828
Genome browser
AA seq
486 aa
AA seq
DB search
MIKSLRPLLLASFLLPMALSVTAAPINTTLPPKVQEALQKAKLQNNALSLVMIPLNGPGT
ATVFNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGVLRGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVQQVTGDLVLDRGFFIQPQLPEFNDDGNDANKPFLVKPDAL
LVNLKALRFVTRNDSGRVLVSVEPPIASIQIDNQVKATNAKQCTGDVRYNPVTAADGSVT
VTVSGQLGDGCSSQTYLSLLDHATYTAGAVRAIWKELGGTIQGRDVLAPVPKTAKVLART
FSPDLAEIIRDINKYSNNTMAQQLFLSLGAQYRTDADGDDAKAAQRVVRQWLAKKGITAP
HLVMENGSGLSRAERVSAREMATMLQAAWRSPYAAEFISSMPIAGSDGTMRKRLKTTALR
GEAHVKTGTLNTVRAIAGFSRDNNGNTWAVVAILNDPKPWGASSVLDQVLLDLYRQPKLA
AAAPGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcattgcgcccattgttactcgccagtttccttttgcccatggccctctct
gtcaccgccgccccgatcaataccaccttgccacctaaagttcaggaagccctgcagaaa
gccaagctgcagaacaatgcactgtccctggtgatgattccgctcaatggccccggcacc
gccacggtgttcaatgcggacgtctcggtcaacccggcatcgaccatgaagctggtcacc
acctacgccgccctggaaatgctcggccccaaccatcagtggaaaaccgagttctacacc
gacggcaccctcagtggcggcgtcctgcggggcaacctgtacctcaagggcggtggcgac
cccaagttgaacatggagaaactctggctgctgatgcgcgacctgcgcgccaatggcgtt
cagcaagtcaccggcgacctggtactggatcgcggcttctttatccaaccgcaattgccg
gaattcaacgacgacggcaacgatgccaacaaaccgttcctggtcaagccggacgccctg
ctggtcaacctcaaggccctgcgtttcgtgacccgcaatgattcgggccgggtgctggtt
tcggtcgagccgccgattgccagcatccagatcgacaatcaggtcaaggccaccaacgcc
aagcagtgcaccggtgacgtgcgctacaacccggtcaccgccgccgacggcagcgtcacc
gtgacggtcagcggccagttgggcgatggctgcagctcgcagacttatctgtcgctgctc
gaccatgccacctacaccgccggcgccgtgcgggcgatctggaaagagttgggcggtact
atccagggccgcgacgtactggccccggtgccgaaaaccgccaaggtcctggcccggacg
ttctccccggatctggcggagatcattcgcgacatcaataaatacagtaacaacaccatg
gcccagcaactgttcctcagcctcggcgcgcaataccgcaccgatgccgacggcgacgac
gccaaggccgcgcagcgcgtggtccgccaatggctggcgaaaaaaggcataacggcacca
catctggtgatggagaacggctccggcctgtcccgtgccgaacgcgtgagcgcccgggaa
atggcgaccatgctgcaagccgcctggagaagcccgtatgcggcagagttcatcagctcg
atgccgattgccggcagtgacggcaccatgcgcaagcgcctgaaaaccacggccctgcgc
ggcgaagcgcacgtcaagaccggcaccctgaacaccgtgcgcgccattgccggcttcagc
cgtgacaacaatggcaatacctgggccgtggtggcgatcctcaacgatccgaagccgtgg
ggagcatcgtcggtgctggaccaggtgttgctggacctgtatcgccagccgaagctggcg
gcggctgcaccgggcctataa
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