Pseudomonas hygromyciniae: JTY93_19595
Help
Entry
JTY93_19595 CDS
T09404
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03420
Nucleotide excision repair
phyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JTY93_19595
03430 Mismatch repair
JTY93_19595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_19595
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JTY93_19595
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JTY93_19595
MMR (mismatch excision repair)
Other MMR factors
JTY93_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
NACHT
DEAD
nSTAND3
AAA_25
IstB_IS21
ATPase
AAA_16
Mg_chelatase
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QSB38452
LinkDB
All DBs
Position
complement(4393635..4395395)
Genome browser
AA seq
586 aa
AA seq
DB search
MTEARDLRDTVIACEKHILVLGGPGSGKTTLALRKAVHRIRQGLLPGQSVLFLSFSRAAV
ARIADAAKLESTTQEKDCLSIQTFHSFFWTILKAHGYLLGAPTKLSILLPQDEKALSAGI
DDDDVGWPAWLVERDRLFREEGRVAFDLFATNVGDLLKSSSYLLQSVADKHPLIIVDEAQ
DTSEPAWGNIQLLASRSRVMCLADQEQQIFDFLPGVGPERISVIRQVLQPFAVDLGTQNH
RSPNSEILCFGNDTLNGVVRGAPYQGISQLMYRPENPTPNWNHLLRRALKELYGSIIAQA
GAMPGTIAILVGNNRSALRMSNALNALGPNVGKAVQHKLHFDEAESLLSARLAAFLLEPK
KSENEAFDIASSMDLIAAARNATGQAKAAIATLKAQALQMRQGKQLKINLVKALRGVLVT
LSESPFTGDPAYDWLAVKGALRGSGQSELLRVADQLDYLVAFKRGHRISAALAAEWIRDG
KYTNARGALDQALAQEQILDGVEAIPGLQIMNIHKAKGKQFDGVIIVREAKRSANGVGSS
FVWRDDDPPYPKSRRLLRVGITRARTHLLLLNPLWPVCPLLKGQQL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcgcgtgatttgcgcgatacagttatcgcctgcgagaagcacattttagta
ttaggcggccccggaagcggcaaaactacgttagctttgcgcaaagcggtccaccggatc
aggcagggattgcttccagggcagtccgtcttattcctcagtttttcacgtgcggctgtt
gctaggatcgcagatgcggcgaagctggagtccacgacgcaggaaaaggattgcctttca
atccagaccttccattcatttttttggaccattcttaaggcgcacggttacctgcttggg
gctccaactaagctatctatcttgcttccccaagatgaaaaagctctatcggcgggtatc
gacgatgatgatgtaggttggcctgcttggcttgtggagcgtgatcgcttgttcagggag
gagggcagggtcgcgttcgatctttttgctaccaacgtaggcgatttgctaaagagcagt
agttacctgcttcaatcggtcgctgataagcacccactcatcatcgtggatgaggcgcag
gacaccagcgagccagcgtggggcaatattcagcttctcgcgtcgaggtcccgggtgatg
tgcctagctgaccaagagcaacagatttttgacttcttgcctggcgtgggaccggaacga
atctccgtgattcgccaggttttgcagccctttgctgtggatttgggaacgcagaatcac
cgtagtccgaattcggagatactttgcttcgggaacgacacgttgaatggcgtcgttcgt
ggggcgccgtatcaaggtatatcacagttaatgtaccgcccagaaaatcccacccctaat
tggaatcatttgctgcgtcgtgctcttaaggagctgtatggctccattatcgcgcaggcc
ggcgccatgccaggcacgatcgccatcctggtcggtaataatcgcagcgctttaaggatg
tctaatgcgctcaacgcactggggcctaatgttggcaaagccgttcaacataagctccat
tttgacgaagcagaatctctgctttcagcacggttagctgcctttcttctagagccaaaa
aaatcagagaacgaagcctttgacatagcatctagcatggatctaatcgctgcggcccgt
aatgccacgggccaggcaaaagctgctattgccacgctgaaagcgcaggctctgcaaatg
aggcagggtaagcagttgaagatcaacctcgtaaaagcattgcgaggtgtgctggtgacc
ctatctgagtctccgttcacgggagatcccgcttacgattggctggcggtgaagggcgcg
ctgcggggaagtggccagagcgagttgctcagagtggcggaccagcttgactaccttgtg
gccttcaagcgtggtcaccgcatctctgccgcattggcagcggagtggatccgcgacggg
aaatacaccaatgctcggggtgccctcgatcaagctttggcgcaggaacaaattcttgat
ggggttgaagcaatacctggtcttcagataatgaatatccacaaggctaaagggaagcaa
ttcgacggtgtgatcatagttagagaagcaaagcggagcgccaacggagtggggtcgtcc
tttgtgtggagagacgacgatccgccgtaccccaaaagtcgaaggctcctgcgagtgggc
atcacgcgtgctcgaacgcacctcctactgcttaatcccctgtggcctgtatgtcctctc
ttaaaagggcagcaactataa
DBGET
integrated database retrieval system
