Pseudomonas hygromyciniae: JTY93_20435
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Entry
JTY93_20435 CDS
T09404
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg01501
beta-Lactam resistance
phyg02020
Two-component system
Module
phyg_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JTY93_20435
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JTY93_20435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyg02000
]
JTY93_20435
01504 Antimicrobial resistance genes [BR:
phyg01504
]
JTY93_20435
Transporters [BR:
phyg02000
]
Other transporters
Pores ion channels [TC:
1
]
JTY93_20435
Antimicrobial resistance genes [BR:
phyg01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JTY93_20435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QSB38596
LinkDB
All DBs
Position
4565467..4566762
Genome browser
AA seq
431 aa
AA seq
DB search
MRVMKWSMIALAVSAGTSQFAMASAQDDAKGFVEDSTFSINTRALYFSRDNRNNKSGASY
SRESGLGFNGLYQSGFTQGTIGVGVDVIGLLGVKLDSGRGRNGTGLFPEGSDGRSEDEYS
KGGGAIKFRLSNTVLKVGDQYTTAPVFASDDSRLLPELPQGISIVSNEIKDLKLEAGHFT
SSVAQAQTFKDSILDFPETSRGIKQANFVGGTYGWTPEFTTSLYYSKVEDYWRKYYANVN
WTHALSDDQSVAVDFNIYDTKSEGAGLQRAAKDDVTKLDNRAFSLQGAYTIGAHTFTLAA
QKVTGDGDYGYGIDGGGTVFLANSVARSDFNAEGEKSFKARYDLDMATFGVPGLSFLAAY
VTGSGANTASTSNGKEWERDLEAKYVIQSGPAKDLSLRIRQATYRSSDGVYYGSASIDEL
RLIAQYPLNIL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctcgctgtttcagcaggcacctcacagttc
gcaatggcgtccgcccaagatgatgccaaaggttttgtcgaagacagcaccttcagcatc
aatacccgcgccttgtacttcagccgggataaccgcaacaacaaatcgggggcaagctac
agtcgggaatccggcctgggcttcaacggtttgtaccagtcgggcttcacccaaggcacc
atcggtgtaggcgttgacgttatcggcctgctgggcgtgaaactggacagcggcagaggc
cgtaatggcactggcctgttcccggaaggttcggatggccgctcagaggatgaatactcc
aagggcggcggcgccatcaagttccgcctctccaataccgtgctgaaagtcggcgaccag
tacaccaccgcaccggtattcgcatccgacgacagtcgcttgctgccagagctgccacaa
ggtatctcgatcgtcagcaacgagatcaaggacctcaagctggaagccggtcacttcact
tccagcgttgcccaggcgcaaaccttcaaggacagtatcctcgacttccctgaaacctcc
cgaggcatcaagcaagccaatttcgtaggcggcacctacggttggacgcctgaattcacc
accagcctctactactcgaaagtcgaagactactggcgcaaatactacgccaacgtcaac
tggacccacgccctgagcgatgaccagtcggtggccgtagacttcaacatctacgatacc
aagagcgaaggtgccggcctgcaacgcgccgccaaagacgacgttaccaaactcgacaac
cgtgcattcagcttgcagggtgcctacaccatcggtgcacacaccttcaccctggcagca
cagaaggttaccggtgacggcgattacggctacggcatcgatggcggcggtacagtgttc
ctggccaactccgtggctcgttccgacttcaacgccgaaggcgagaaatccttcaaagcc
cgttatgacctcgacatggccacctttggtgtacctggcctgagcttcctggctgcgtac
gtcaccggtagcggcgccaacaccgcctcgacctcgaacggcaaagagtgggaacgcgac
cttgaagccaagtacgtgatccagagcggcccagccaaagatctgagcctgcgtattcgc
caagcgacttatcgttcgtctgatggtgtttactacggttcggcgtctatcgacgaactg
cgtctgatcgcgcaatacccgctgaacatcttgtaa
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