KEGG   Pseudomonas hygromyciniae: JTY93_21415
Entry
JTY93_21415       CDS       T09404                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
phyg  Pseudomonas hygromyciniae
Pathway
phyg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:phyg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    JTY93_21415 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyg03019]
    JTY93_21415 (rnc)
   03009 Ribosome biogenesis [BR:phyg03009]
    JTY93_21415 (rnc)
   03036 Chromosome and associated proteins [BR:phyg03036]
    JTY93_21415 (rnc)
Enzymes [BR:phyg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     JTY93_21415 (rnc)
Messenger RNA biogenesis [BR:phyg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JTY93_21415 (rnc)
Ribosome biogenesis [BR:phyg03009]
 Eukaryotic type
  90S particles
   RNase
    JTY93_21415 (rnc)
 Prokaryotic type
  rRNA processing factors
   JTY93_21415 (rnc)
Chromosome and associated proteins [BR:phyg03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     JTY93_21415 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: QSB38777
UniProt: A0ABX7JTS1
LinkDB
Position
complement(4790138..4790827)
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFNRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVAKERVMAWLASEIDSLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRVFFVECEVTLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttctttgagtcgtcttgagcgtcagctcggctacaccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagttttgccgggcgcaacaacgaacgcctggaa
tttttgggtgatgccattctcaacttcgccgctggcgaagccttgttcaaccgcttcccc
ctggcccgtgaaggccagctgtcgcgcctgcgcgcgcgcttggtgaaaggcgagaccctg
gccgtgctggcccgtggttttgacctgggcgagtacctgcgtctggggtccggcgagttg
aaaagcggcggtttccgtcgcgagtcgatcctggccgatgccctggaagccttgatcggt
gcgatctatctcgatgccgggatggaagtggccaaggagcgggtcatggcttggctggcg
tcggaaatcgacagcctgaccctggtggacaccaacaaggatcccaagacccgcctgcag
gaattcctgcagtcgcgcggctgcgaactgccacgctatgaagtggtggatatccagggt
gagccgcattgccgtgtgttcttcgtcgaatgcgaagtcaccttattgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga

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