Pseudomonas hygromyciniae: JTY93_23050
Help
Entry
JTY93_23050 CDS
T09404
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03030
DNA replication
phyg03430
Mismatch repair
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JTY93_23050
03430 Mismatch repair
JTY93_23050
03440 Homologous recombination
JTY93_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyg03032
]
JTY93_23050
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_23050
Enzymes [BR:
phyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JTY93_23050
DNA replication proteins [BR:
phyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JTY93_23050
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JTY93_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QSB39076
UniProt:
A0ABX7JUM7
LinkDB
All DBs
Position
complement(5147735..5148346)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPTAPNHKLGTLTSYAQLPHTGKAHRAMADAEMAANLTAHLAQELRRTHGLRELSHD
LLCSLQKVPAAKINDHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatctcgccgagcagcagttgc
cgggccacggaaattgccgtggtcatcctggaacagggccagattgtggaccgctaccag
agcctgatgaacgccggcgtacgcgtgccgggttttatcgagcaactgaccggcatcagc
aacgccatgctgcgcagcgcaccgccggcggagcgggtgatgaatgaggtcaacgagttc
gtcggcaccacaccgctactggcgcacaacgccgcgttcgaccagaagttctgggacttc
gagctcggcctgatccgccgcacccgcctgcaaaaattcgcctgttcactgctcctggcc
cgccggctgatgcccacggcgcccaaccacaagctcggcaccttgacctcctacgcccag
ttgccccataccggcaaggctcaccgggcgatggcggacgcggaaatggcggccaacctc
accgcccacctggcccaggaactgcgccgcacccacggcttgcgcgagctgtcccatgac
ctgctgtgcagcttgcagaaagtgccggcggcgaagatcaatgaccatctgaagaagcat
cgcgggttctga
DBGET
integrated database retrieval system