KEGG   Pseudomonas hygromyciniae: JTY93_23050
Entry
JTY93_23050       CDS       T09404                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
phyg  Pseudomonas hygromyciniae
Pathway
phyg03030  DNA replication
phyg03430  Mismatch repair
phyg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JTY93_23050
   03430 Mismatch repair
    JTY93_23050
   03440 Homologous recombination
    JTY93_23050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phyg03032]
    JTY93_23050
   03400 DNA repair and recombination proteins [BR:phyg03400]
    JTY93_23050
Enzymes [BR:phyg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JTY93_23050
DNA replication proteins [BR:phyg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JTY93_23050
DNA repair and recombination proteins [BR:phyg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JTY93_23050
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2
Other DBs
NCBI-ProteinID: QSB39076
UniProt: A0ABX7JUM7
LinkDB
Position
complement(5147735..5148346)
AA seq 203 aa
MERIAVIDFETTGISPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPTAPNHKLGTLTSYAQLPHTGKAHRAMADAEMAANLTAHLAQELRRTHGLRELSHD
LLCSLQKVPAAKINDHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatctcgccgagcagcagttgc
cgggccacggaaattgccgtggtcatcctggaacagggccagattgtggaccgctaccag
agcctgatgaacgccggcgtacgcgtgccgggttttatcgagcaactgaccggcatcagc
aacgccatgctgcgcagcgcaccgccggcggagcgggtgatgaatgaggtcaacgagttc
gtcggcaccacaccgctactggcgcacaacgccgcgttcgaccagaagttctgggacttc
gagctcggcctgatccgccgcacccgcctgcaaaaattcgcctgttcactgctcctggcc
cgccggctgatgcccacggcgcccaaccacaagctcggcaccttgacctcctacgcccag
ttgccccataccggcaaggctcaccgggcgatggcggacgcggaaatggcggccaacctc
accgcccacctggcccaggaactgcgccgcacccacggcttgcgcgagctgtcccatgac
ctgctgtgcagcttgcagaaagtgccggcggcgaagatcaatgaccatctgaagaagcat
cgcgggttctga

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