Pseudomonas hygromyciniae: JTY93_23300
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Entry
JTY93_23300 CDS
T09404
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JTY93_23300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_23300
Enzymes [BR:
phyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JTY93_23300
DNA repair and recombination proteins [BR:
phyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JTY93_23300
Prokaryotic type
JTY93_23300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
DUF6412
PGM_PMM_III
Motif
Other DBs
NCBI-ProteinID:
QSB39122
LinkDB
All DBs
Position
5200951..5201634
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AA seq
227 aa
AA seq
DB search
MSSSHPKIPAKPLPDGFFDRDAQTLAKDLLGKVIRHRVGDVWLSARIIETEAYYLAEKGS
HASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSAQGPGNAVLIKSAYPWTDEVSGPASL
AQMLLNNPDASGRPRPAHKLCAGQTLLCKALGLKVPMWDAKRFDQEGLYVEDVGLAPAQI
IQTTRLGIPGGRDEHLMYRFVDADLAPYCTRNPLRRGQVEGRDYVLI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcccaccccaagatccccgccaagcccctgcctgatggttttttcgaccgc
gatgcgcaaacgctcgcgaaagatttgctgggcaaagtcatccgccatcgtgtcggcgat
gtgtggctgtcggcgcgaattattgaaaccgaagcctattacctggccgaaaaaggcagc
catgcgtcccttggctacacagaaaagcgtaaggctttgtttctggatggcggccacatc
tatatgtactacgcccgtggtggggactccctgaacttcagcgcccaggggccaggcaac
gccgtcttgatcaagtcggcctacccatggacggatgaggtctcagggcctgcaagcctg
gcgcaaatgttgttgaacaatcccgacgctagcggccgtccgcgcccagcccataagctc
tgcgccggacagacgttgctgtgcaaggccctgggtttgaaggtaccgatgtgggacgcc
aaacgcttcgaccaggaggggctctacgtcgaagatgtgggcctggcgcccgcgcaaatt
atccagaccacccgcctgggcattcccggcgggcgcgatgaacacctgatgtatcgcttc
gtggatgctgacttggcgccctattgcacacggaacccgttgcgacgcggccaggtcgaa
ggccgcgattacgttttgatttga
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