Pseudomonas hygromyciniae: JTY93_24945
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Entry
JTY93_24945 CDS
T09404
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03030
DNA replication
phyg03430
Mismatch repair
phyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JTY93_24945
03430 Mismatch repair
JTY93_24945
03440 Homologous recombination
JTY93_24945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyg03032
]
JTY93_24945
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_24945
Enzymes [BR:
phyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JTY93_24945
DNA replication proteins [BR:
phyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JTY93_24945
DNA repair and recombination proteins [BR:
phyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JTY93_24945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QSB39361
UniProt:
A0ABX7JVF6
LinkDB
All DBs
Position
5512859..5513566
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AA seq
235 aa
AA seq
DB search
MSLFSWLRPHRPGLDALQQARLQQLPAPGTLGDNTLRDQRWVVLDLETSGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLLRAHTKLSPSVLIHGLGPSAIAAGCDPAEALLDFMDFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLAHPFLDVADLAPLLCPQAHIREAGLDDWIAHF
NLQVGERHHASADALATAELMLILFSRARQQGLDSPAALQQRLSQWKRRKQAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgttcagttggctacgcccacaccgaccggggctcgatgccctgcaacaagca
cgcctgcaacaactgccagcccccggaacactcggcgacaacaccttgcgcgaccagcgc
tgggtggtcctggacctggaaaccagcggcctgaacctcaatcgcgatcaggtgttgtcg
attggtgcagtggtgatcgaagacggtgccatcgacttttcccagcagttcgagcgcact
ttgctgcgggcgcacaccaaactcagccccagcgtcctgatccacggcctggggcccagt
gcgatcgccgccggttgcgacccagccgaggcgttgctggacttcatggattttgtcggc
gacagcccgctgctggcgttccacgcaccgttcgaccaacacatgctcggccgggcgctc
aaggacagcctgggttatcgcctggcccatccgttcctcgacgtggcagacctggcgcca
ctgctatgtccccaagcgcatattcgcgaagcgggcctggatgactggatcgcccacttc
aacctgcaagtcggtgagcgccatcacgccagcgccgatgccctggccaccgctgagttg
atgttgattctgttcagccgcgcccgccagcaagggctggacagccccgccgcgttgcag
cagcgcctgagccagtggaaacggcgcaagcaagccccgtccttctaa
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