Pseudomonas hygromyciniae: JTY93_25040
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Entry
JTY93_25040 CDS
T09404
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00260
Glycine, serine and threonine metabolism
phyg00460
Cyanoamino acid metabolism
phyg00630
Glyoxylate and dicarboxylate metabolism
phyg00670
One carbon pool by folate
phyg00680
Methane metabolism
phyg01100
Metabolic pathways
phyg01110
Biosynthesis of secondary metabolites
phyg01120
Microbial metabolism in diverse environments
phyg01200
Carbon metabolism
phyg01230
Biosynthesis of amino acids
phyg01240
Biosynthesis of cofactors
phyg04981
Folate transport and metabolism
Module
phyg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JTY93_25040
09102 Energy metabolism
00680 Methane metabolism
JTY93_25040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JTY93_25040
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JTY93_25040
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JTY93_25040
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JTY93_25040
Enzymes [BR:
phyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JTY93_25040
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSB39380
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Position
complement(5534361..5535614)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALINAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEAMEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagaccagatccagggatatgacgacgcactgctggcggccatgaat
gccgaggagcagcgtcaggaagatcatatcgagctgatcgcgtcggagaactacaccagc
aagcgtgtgatggaagctcaaggcagcggcctcaccaacaaatacgccgaaggctaccct
ggcaagcgctactacggcggctgcgagcatgtggataaagtcgaggccctggccatcgag
cgcgccaagcagctgttcggcgccgattacgccaacgtgcaaccgcactccggttcgtcc
gccaacagcgccgtgtacctggcgctgatcaatgccggcgacaccattctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcaacaccgacaccggcctgatcgactacgacgaagtcgag
cgcctggccgtggagcacaagccgaaaatggtcgtggccggtttctctgcctactccaag
accctggattttccgcgctttcgccagatcgccgacaaggtgggcgcgctgctgttcgtc
gacatggcccacgtcgcaggcttggttgccgccggcctgtacccgaacccgctgccgtac
gccgatgtggtgaccaccaccacccacaagaccctgcgcggtccacggggtggcctgatc
ctggccaagtccaacgaagagattgagaaaaaactcaactccgccgtgttcccaggcgca
cagggcggcccgctgatgcacgtgatcgcgggcaaggctgtgtgcttcaaggaggcgatg
gagccaggcttcaaagcttatcaacagcaggtgatcgacaacgcccaggccatggccagc
gtgtttatcaagcgtggctacgacgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgccaaggcctcaccggcaaggacgcagacgccgccctcggtcgcgcc
catatcaccgtcaacaagaacgccgtgcccaatgacccgcagtcgccatttgtgacctcg
ggcctgcgcatcggcactccggcggtgaccacacgcggttttaaagtggcgcagtgcgtc
gagttggctggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
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