Pseudomonas hygromyciniae: JTY93_25220
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Entry
JTY93_25220 CDS
T09404
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyg03009
]
JTY93_25220 (dbpA)
Enzymes [BR:
phyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JTY93_25220 (dbpA)
Ribosome biogenesis [BR:
phyg03009
]
Prokaryotic type
rRNA helicases
JTY93_25220 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QSB39415
LinkDB
All DBs
Position
5580737..5582122
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AA seq
461 aa
AA seq
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MTTIATAFNTLPLSAAMLANLDSLGYAEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPAR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDEQIEQRFYEISPEERMDAVTKVLS
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDSLDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
LLQKAPLNWDQLSNLKSQGGAPLLPVMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAYVAVERSVAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactttgccgctctccgccgccatgctggctaac
ctcgactcgctgggttatgccgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaggggctggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgttgaacccgatcaacccgcgctacttcggttgccaggccctggtgatg
tgcccgacccgcgagctggctgaccaggtggccaaggaaatccgccgcctggcccgcgcc
gaagacaacatcaaggttctgaccctgtgcggcggcgtgtccctcggcccgcagatcgct
tccctggagcatggtgcccacgtcatcgtcggcactccgggccgcatccagcaacacctg
cgcaagggttcgctggtgctggacggcttgaacacactgatcctcgacgaagccgaccgc
atgctcgacatgggtttctacgacgccatcgaagacatcatcagcaagaccccagcccgt
cgccagaccctgttgttctcggccacctacccggtgagcatcaagcaactggcctccaaa
ttcatgcgcgcgccgcagcaggtcaaagccgaagcgttccactccgacgaacagatcgag
cagcgtttctacgaaatctccccggaagaacgcatggacgcggtgaccaaggtgctgtcg
cacttccgtccggcctcctgcgtagccttctgctttaccaagcagcaagtgcaggaaacc
gtggatcacctgaccgccaagggcatttctgcagtcggcctgcatggcgacctggaacag
cgcgaccgtgaccaggtgctggcgatgtttgccaaccgcagtacttcggtgctggtagcc
accgacgtcgcggcccgtggtttggacatcgactcgctggacatggtgatcaacgtcgaa
ctggcccgcgattcggaaatccacattcaccgcgtgggccgtaccggtcgcgctggcgaa
accgggatcgccatcagcctggtagcgccgtccgaagcgcaccgcgcccaggccatcgaa
ctgctgcaaaaagccccgctgaactgggaccaactgagcaacctcaaatcccagggcggc
gcgccgctgctgccggtgatgagcacgctgtgcattgccgccggccgcaaagacaaggtt
cgcccaggcgacatccttggcgcactgaccggtgaagccgggatcccgggcgcccaggtc
ggcaagattgcgatctttgacttccaggcctacgtggcagtggagcgcagcgtcgccaag
caggcgttgcagcgcttgaacgacggcaagatcaagggccgctcgttgcgcgtgcggatc
ctgtaa
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