Pseudomonas hygromyciniae: JTY93_25650
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Entry
JTY93_25650 CDS
T09404
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyg03021
]
JTY93_25650 (rpoH)
Transcription machinery [BR:
phyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JTY93_25650 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QSB39499
LinkDB
All DBs
Position
complement(5666849..5667703)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctctggtcccaggcgcgaacctggaagcctat
gtgcacacggtcaacagcattcctttgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctatagcggctacggcctggcccaggctgacctgatc
caggaaggcaacgtcgggctgatgaaggctgtaaaacgcttcaacccggaaatgggtgtg
cgcctggtgtcgttcgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcattgtgaaagtggcgaccaccaaggcccagcgcaaactgttcttcaacctg
cgcagccagaagaaacgcctggcgtggctcaacaacgaggaagtccaccgtgtggccgaa
agcctcggtgtggagcctcgggaagtgcgcgagatggaaagtcgcctgaccggccatgac
atggccttcgacccggccgccgaagcggacgacgacagcgctttccaatcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagatgccgattggagcgac
aactccaaccacaacctgcacgaagcactggaagtgctggacgaccggagccgtgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcaaaagtac
aacgtgtcggccgagcggattcgtcagcttgagaagagcgcgatgaataagcttaaattg
tcgatcgccgcctaa
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