Pseudomonas hygromyciniae: JTY93_25735
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Entry
JTY93_25735 CDS
T09404
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyg03009
]
JTY93_25735
Enzymes [BR:
phyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
JTY93_25735
Ribosome biogenesis [BR:
phyg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JTY93_25735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_15
Methyltransf_31
MTS
TRM5-TYW2_MTfase
Methyltransf_25
UPF0020
PrmA
FtsJ
Methyltr_RsmB-F
Methyltransf_24
TRM
Spermine_synth
YfdX
Motif
Other DBs
NCBI-ProteinID:
QSB39514
LinkDB
All DBs
Position
5684572..5685768
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRNGHLWVYSNEIDVAATPLHGFQAGDQAILEAAGGKTLGIVAMS
PNNLICARLLSRDIKLPLDKSLLVHRLNVALSLRDRLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMEAHKEDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVP
EWVALEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGKRVLDLYSYIGGWGVQAAT
FGASEVFCVDASAFALDGVERNAALNGVAEKMTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDMKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQMLERGGQGPDHPVHPAIVETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccaagcctgcgtctcaaagccaacgccgatcgtcgtttgcgcaacggccac
ctgtgggtctacagcaacgaaatcgatgtggccgccaccccactccacggcttccaggca
ggcgaccaggccatcctcgaagccgccggcggcaagaccctgggcatcgtggccatgagc
ccgaacaacctgatctgcgcgcgcctgctgtcgcgcgacatcaagttgcctttggacaag
tcgctgctggtgcaccgcctcaacgtcgccctgtccctgcgcgaccgcctgttcgacaag
ccgttctaccgcctggtctacggcgattccgacctgctgccgggcctggtggtcgaccgt
ttcggcgacatcctggtggtgcagatcgcctcggcgaccatggaagcccataaagaagac
gtgatcgccgcgctgacccaagtgctcaagcccagcggcatcctgttcaagaacgattct
gccgcacgcgacgccgaaggcctcaaccgctacgtcgaaaccgtgttcggcctggtaccg
gagtgggttgcgctggaagaaaacggcgtgaaattcgaagccccggtgatccagggccag
aagaccggctggttctacgaccaccgcatgaaccgcgcacgcctggcgccgtacgccaaa
ggcaaacgcgtcctcgacctgtacagctacatcggcggctggggcgtgcaagctgcaacg
ttcggcgccagtgaagtgttctgcgtcgacgcctcggccttcgccctcgacggcgtcgag
cgcaacgccgcgctcaacggcgtcgcggagaaaatgacctgcatcgaaggcgacgtgttt
gaagcgttgaaagaactgaaagccagcgaagagcgcttcgacgtgatcgtcgccgaccca
ccggccttcatcaaacgcaaaaaagacatgaaaaacggcgaaggcgcctaccgccgcctc
aacgagcaagccatgcgcctgctcagcaaggacggcatcctggtcagcgcctcctgctcc
atgcacctgccggaagacgacctgcaaaacatcctgctgaccagcgcccgccacctggac
cgcaatatccagatgctcgaacgcggcggccagggcccggaccacccggtgcacccggcg
attgtcgagacccgctacatcaagagcattacgtgccggttgttgcccaatagctaa
DBGET
integrated database retrieval system
