Phyllobacterium sp. 628: HB779_04500
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Entry
HB779_04500 CDS
T08362
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
phyl
Phyllobacterium sp. 628
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyl03400
]
HB779_04500 (addB)
Enzymes [BR:
phyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HB779_04500 (addB)
DNA repair and recombination proteins [BR:
phyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HB779_04500 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QND51240
UniProt:
A0A7G6S9Q8
LinkDB
All DBs
Position
590950..594093
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AA seq
1047 aa
AA seq
DB search
MADRHSPRVFSIAPGAPFLPALVDALLSGNLIPDYPANPTDPLALAQATIYVPTRRAART
LRSLLVEKSPAKSAILPVIRPLGDVDEDAAMFDMGSDAFFDLLPPVSSTERLLLLARLVR
PWRERLPEHVRALFGNEDIAIPATTADAIWLARDLAGLMDQVETESTGWNTLSNIVSEEL
PNWWQVTLDFLNIVTSLWPDILSDRHRSNPAAHRNHLIELEAERLLRSPPPGPVIAAGST
GSIPATAHLLAAIASLPQGAVVLPGLDRDMDEPSWQVLANTEDNPSIFGHPQFGLRKLLG
ELSVLRQDVVHLGTVTPQKRSREHLLAEAMRPAETSEAWSTIDRESSGFSAAIAPVALIE
AANEREEALAVAIALRDAIEEPHKTAALITADRDLARRVASELARFNITADDSGGHALRE
TQPATLLRLTLETVFNPGDPVVLLALLKHPLTRLGMDRNAVRQAAETIELIALRGGTGRA
TLSGLAGFFEKRLAESSATPFEPVWLRQISVERIEAARTVCAALGRCMDELGAFTETVEP
VEMGDIVRGTIASLENLVRDDKGDIAGLYSGAAGEQFAAFLRNLVSADSGLDFSAVEWPA
MIEALMAGEVVKPKAGAHPRLFIWGALEARLQTVDTVIIGGLNEGSWPNKTRNDPFMSRP
MKSIINLEPPERRTGLAAHDFQMALGMERVILSRSQRSANAPTVASRWLQRLETVLGKKA
SVDLRVRGAQYLHWTREIDDAPDEDFVKRPEPKPPLDARPKHFSVTEIETLRRDPYAIFA
RRILRLRPIEPLIRDPDAAERGSLFHDILAHFTEQGLDPVHADASAILSEIGRRYFDDIA
LPEEIDAVWWPRFLNLVPEFLQWERDRAPLLAERHPEIASKKIPVEATGVTLSGRADRVD
LMRDGTVEIIDYKTGSTPSRKQAHVLLSPQLALEAALLARGAFHEVGKRSASDLLYVRLR
PNGKVDPESILKVGSAANKSEKTAPELGELSWLRLNELLIAYQDAEKGYLSRALPFKESD
LTGDYDHLARVLEWSAGGADDGGEGGE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccggcacagccctcgtgttttttcgattgctcccggcgccccgtttcttccc
gctctggtggatgcacttctttccggcaacctgattccggactatcccgccaaccccact
gatcccttggccttggcgcaggcgacaatttatgtgccaactcgccgcgcggcgcgcact
ttgcggtcgctgctggtagagaagagcccggctaaatccgcgatcctaccggtcatccgc
ccgctgggtgatgtggacgaagatgcggccatgtttgacatgggttcggatgcttttttc
gatctgctgccgcctgtcagttccaccgaacggctcttgctgctggcacggctggtgcgg
ccatggcgtgaacgtctgccggagcatgtccgcgccctgttcggcaatgaggatatcgct
attccggccaccacggcagatgcaatctggctggcgcgtgatcttgccgggttgatggat
caggtcgaaaccgaatccaccggctggaataccctgtcaaatattgtttcggaagagctc
ccgaactggtggcaggtgacactggatttcctcaacattgtcaccagcctttggcctgac
atcctgtcagaccggcatcgctccaatcctgcggcgcatcgaaaccacctgattgagctg
gaagcggagcgtttactgcgcagcccgccgccgggtccggtaatcgcggcaggttccacc
ggttcaattccggcgacagcgcatctgttggcagcgattgcctctttgccgcagggcgcg
gtggttctgcccgggcttgatcgcgatatggatgaacccagctggcaggtgctggccaat
acggaagacaatccgtccattttcggccacccgcaattcggcttgaggaaacttctgggt
gaactcagcgtgttgcggcaggatgtcgtgcatctcggcactgtgacgccgcagaagcgc
tcccgcgagcatctgctggcggaagccatgcgtccggctgaaaccagcgaggcgtggagc
acaattgaccgggagagcagcgggttttctgcagctatcgcacccgtcgcgctgatcgag
gcggccaatgagcgcgaagaagcgctggccgttgccattgccctgcgcgatgccattgaa
gagccgcataagacggctgcactcattactgcggaccgtgatctcgcccggcgggttgcc
agtgaacttgcgcgcttcaacattactgctgatgattccggcggccatgcgctgcgcgag
acgcagcccgcaacgcttttgcgattgacactggaaacggtgttcaaccccggtgatccg
gtggttctgttggcattgctcaaacacccgctgacccggctgggtatggaccgcaacgca
gtgcggcaggcagctgaaaccatcgaattgatagcgctgcgcggcggtaccggccgcgcc
accttgtcagggctcgccggattctttgagaaacgtcttgccgaaagcagcgcaacaccg
ttcgaaccggtttggctgcggcagatctcggtggagcgtattgaagctgcgcgcacagtc
tgcgccgcgcttggccggtgcatggacgagcttggtgcctttaccgaaactgtagaaccg
gtggagatgggcgatatcgttcgtggcaccatcgccagtctcgaaaatctggtgcgtgac
gacaaaggcgatatagcaggcctttattccggcgcggccggtgaacaatttgctgccttt
ctgcgcaaccttgtctccgccgattccggccttgatttctctgccgtcgaatggccggca
atgatcgaggcgctgatggcgggtgaggtggtcaagccgaaggctggtgcccatccgcgt
ctgttcatctggggtgcgctggaagcgcgccttcaaactgttgatacggtgatcatcggc
gggctgaatgaaggctcctggccaaacaaaacgcgcaatgatccgttcatgtcgcggccg
atgaaatccatcatcaatctggaaccgccggaaaggcgtacgggtctggcggcgcacgat
ttccagatggcccttggtatggaacgggtaatcctcagccgctcgcagcgctctgccaac
gcaccgactgttgcttcgcgctggttgcagcggctcgaaaccgtgctgggcaagaaggcg
agcgtagacctgcgtgtgcgtggtgcacaatatctgcattggacacgcgagattgacgat
gcgccggatgaggatttcgtcaaacgtccagaaccaaagccgccgctcgacgcgcggccc
aaacatttctctgtcacggaaatcgagacattgcggcgcgatccctacgcgatctttgcc
cggcgtatcctgcggctgcgtccgattgagccgctcattcgtgatcctgatgctgcagag
cgcggctcactgtttcacgacatcctcgcgcatttcactgaacagggcctcgatcccgtt
catgccgatgcatcagcgattctttccgaaatcggccggcgctatttcgacgacatcgcc
ttgccggaggaaatcgatgcggtgtggtggccacgcttcctcaatcttgtaccagagttt
ctgcaatgggagcgcgaccgggcacctttgctcgccgaacgccatccggaaattgcttcc
aaaaaaatacccgttgaagccactggcgtaacattatcgggccgggcggatcgtgtggac
ctgatgcgcgacggcacggtggaaatcatcgactacaagaccggctccacgccatcgcgc
aaacaggcccacgtgctgctgtcgccgcaactggcgctggaagcagcgctgctggcccgt
ggtgcgtttcatgaggtcggcaagcgctcagcctctgatttgctctatgtccgcctgcgc
ccgaacggcaaggtcgatccggaatcaatcctcaaggtcggctctgctgccaacaagagt
gagaaaactgcgcctgaattgggtgagctttcatggctgcggctgaacgaactgctgatt
gcctatcaggatgctgaaaaaggttatctgtcgcgggcattgccattcaaggagagcgat
ctgaccggcgattatgatcatcttgcccgggtgctggaatggtcggcaggcggcgcggat
gatggcggcgagggcggcgaatga
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