Phyllobacterium sp. 628: HB779_04505
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Entry
HB779_04505 CDS
T08362
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phyl
Phyllobacterium sp. 628
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyl03400
]
HB779_04505 (addA)
Enzymes [BR:
phyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HB779_04505 (addA)
DNA repair and recombination proteins [BR:
phyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HB779_04505 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QND51241
LinkDB
All DBs
Position
594090..597593
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AA seq
1167 aa
AA seq
DB search
MKKPLIIPAETITDQNRAANPQDSVWVSANAGSGKTHVLTERVIRLLLDGTDPSKILCLT
YTKAAAAVMQNRVFARLSEWATMPAEALEQTIEKIDGKRPGQTRLAQARRLFARALETPG
GLKIQTIHAFCEAILHQFPLEANIAGHFELMDDMMQTVLAGEARRQLLQTARLDGNVELA
AAFNDVLDAAGEFGLQELLDEAVHKRHDLTQFIREVGHDALRRPLFFAQFGFTGHETEAD
ILSALWPVPEFTRDVLEDIMAVPKGASRAQEFALLLRFAKVNDQIDEREDVLRAAFLKAT
GEPKSGGYVGSKGVTDRIPDFVERYERAADRVFAGLDRLKQLRQIRLTLSALVLVDDLIG
RYQQMKRTRGLLDFDDLIVRTVTLLARQDAGPWVQYKLDKGIDHILVDEAQDTSPNQWRV
IRLLSEEFFSGSTARNVRRTLFAVGDEKQSIYSFQGAIPEDFARHGKTTQKSAQNAELSF
AKVNLNFSFRSVPDVLSAVDEVFKRPEANRGFGADHGATVHTAIRSHDPGEVQVWDMLTP
ETTQQEEDWRTPVDSLPAPPIRLAEQIAKTIDLWLKNGEIIEGKNRRLQARDIMVLVRKR
DQFMPALSRELKKRHVPVAGADRLKLTDHIAVKDLMALGRFVLLPSDDLSFAALLKSPLF
KWDDDQLFDLSYGRAENETLHQRLTIRARNDMALAAVAKRLQDWRNRADTVPVFEFYADI
LGSGGARKDLLARLGHEAGDVIDEFQNYAIATEKTGLPGLQAFLETLEAATPEIKRELDQ
SRDEVRIMTVHAAKGLEAAVVFLVDSGSSASSGGRTPNLLSFPMKEEEGWQGKGFLFVPS
KSYATAFTGSIVDNLKVRSEEEYRRLLYVGMTRAEDRLIVCGYRGARQSPDTWHSLVDAA
LTESSEPFDHPVEDIVAKRYRKTERTSAPVQEPESPSMTPVLPFPISYRAPMAREAGLPR
PLAPSGVSLLIEPEEEPPLVTGSPVLGDDGRDPSFAIRRGTVIHALLQTLPNLPVDQRRT
AAERYLSRAAFDWQPEEIENALKSAFSVMDDPRFAPVFATGSLAEIAVMGTLHLRGKDHA
ISGVIDRLAVSEDRVLIVDYKTNRPPPRSFGDVPDAYVAQLALYRQLLEPLYPGKNVEAA
LLFTEGPYLIDIPVNEMQGALARLTAS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcctctcatcattccggccgaaaccatcacagaccagaacagggctgccaat
ccgcaggattccgtttgggtgtcggccaatgccggttccggcaagacccacgttttgacc
gagcgcgtcatccgccttttgctcgatggtaccgatccgtcgaagatactgtgtctgacc
tataccaaagctgcggcggcggtcatgcagaaccgcgtctttgcccggctgtcggagtgg
gcgacgatgcctgcggaggcgctggagcaaaccatcgagaagatcgatggcaagcgtccc
ggccaaacccggcttgcacaagcccgccgcctgtttgcccgcgcactggaaacgccgggg
gggctgaaaatccagaccatccacgctttctgcgaggccattctccatcagttcccgctg
gaagcgaacattgccggccatttcgaattgatggacgacatgatgcagacggtgctggct
ggcgaagcccggcggcaattgctgcagacagcccggctggacggcaatgtggaacttgct
gcagcctttaacgatgtgcttgatgctgccggtgaattcggtttgcaggaactgctcgat
gaggcggtccacaagcgccacgacctgacccagtttatccgcgaagtcgggcacgatgcc
ctgcgccgcccattgttctttgcccagttcggtttcaccggccatgagacagaagcggat
atcctgtctgcgctctggccggtgccggagttcacgcgcgatgtgctggaagacattatg
gcggtgccgaaaggcgcctcccgcgcgcaggaattcgccctgctgctgcgctttgccaag
gtgaacgaccagattgatgaacgcgaagatgtgctccgcgccgcattcctgaaagcaacc
ggcgaacccaagagcggcggctatgtcggctcgaaaggtgtgacggaccgcattccggat
tttgtcgaacggtatgaacgtgctgcggacagggtatttgccggcttggatcgcctcaag
cagctgcggcaaatccggctgaccctgtcggcgctggtcctggtcgatgatcttataggc
cgttaccagcagatgaagcggacgcgtggtctgctcgattttgacgatctgatcgtacgc
acggttaccctgctggcgcggcaggatgcggggccgtgggtgcagtacaagctcgacaag
ggcatcgatcacattcttgtcgacgaggcgcaggataccagccccaatcagtggcgggtg
atccgcctgctgagcgaagagtttttctccggcagcaccgcccgcaatgtcagacggact
ctgtttgcggtgggtgacgaaaaacaatccatctattcgtttcagggcgccatcccggaa
gattttgcccgccacggcaaaacaacgcagaaaagtgctcagaacgctgaactgagcttc
gccaaggtcaatctcaacttctccttccgttccgtgccggatgtgctttcagccgtcgat
gaggttttcaagcggcccgaagccaatcgcggctttggtgcggaccatggtgcgacggta
cacacggctatccgctcgcacgatcccggcgaagtgcaggtctgggacatgctgacgccg
gaaacgacgcagcaggaagaagactggcgcaccccggtggacagtcttccggcaccgccc
attcgccttgccgagcagatcgccaagacgattgatctctggttgaagaatggcgaaatt
atagagggcaagaaccgtcggctgcaggcgcgcgatatcatggtgctggtgcgcaagcgc
gatcagttcatgccggccctgtcgcgcgagttgaaaaagcgtcatgtgcccgtcgccggt
gcggaccggctgaaactcaccgatcatatcgccgtcaaggatctgatggcgcttgggcgg
ttcgtgctgctgccatccgatgatctgtccttcgcggcgctgctgaaaagcccgctgttc
aaatgggacgacgatcagctattcgacctgtcctatggacgcgcggaaaacgagacattg
catcagcggctgaccattcgtgccaggaatgatatggctctggctgctgtcgccaagcgc
ttgcaggactggcgcaaccgcgccgatacggtgccggtatttgagttttacgcggatatt
ctcggcagtggtggcgcgcgcaaggaccttctggcccgcctcggccatgaggctggcgat
gtcatcgacgagttccagaattacgcgattgcaacggagaagaccggcttgcccggactt
caggcatttcttgagaccttggaagcggccacgccggagatcaaacgtgaactcgaccag
agccgcgatgaagtgcgcatcatgaccgtgcatgccgccaaaggtctggaagccgccgtg
gtgtttctggtcgattccggcagttccgcctcgtcgggcggacgaacccctaaccttctg
tcttttcctatgaaagaagaggagggctggcaggggaagggctttctgtttgtgccctcc
aaatcctatgccaccgctttcaccggatcgattgtcgataatctgaaagtgcgttcggaa
gaggaatatcgccgcctgctctatgtcggcatgacccgcgccgaggatcgtttgatcgtt
tgtggttatcgtggcgcgcgtcagtcgcccgatacatggcatagtcttgttgatgcggcg
ctgacggaatcaagcgaaccgtttgatcacccggttgaagatatcgtggccaagcgctac
cgcaagacggaacgcacgagcgccccggtacaggagccggagagcccgtcgatgacgccg
gttctcccattcccgatttcctatcgtgcgcccatggcgcgggaagcgggtttgccgcgt
ccgctcgcaccgtccggcgtctcgcttctgatagagccggaggaagaaccgccactggtg
accggatcgcctgtgcttggcgatgatggcagagatccctcttttgccatccggcgtggt
acggtcatccatgccttgttgcagacattgcccaacctgcctgttgatcaacgcaggact
gccgccgagcgctatctttcccgcgcggcctttgactggcagccggaagaaatagaaaac
gcgctcaaatccgcattctccgtcatggatgatccgcgttttgcgccggtttttgccaca
ggttcactggctgaaatcgctgtcatgggaacgctgcatctgcgcggcaaggatcatgcg
atatccggcgtcattgaccgcctggcagtcagtgaagaccgcgttctgattgttgattac
aagaccaatcgcccgccgccacgttcattcggggatgtgccggatgcctatgtggcgcag
ctggccctgtaccggcagctgctggagccgctttatcccggcaagaacgtagaagcggcc
ttgctgtttacggaaggtccgtatctaatcgatattccagtgaatgagatgcagggtgca
cttgcccgtctcaccgcatcgtga
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