Phyllobacterium sp. 628: HB779_06395
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Entry
HB779_06395 CDS
T08362
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
phyl
Phyllobacterium sp. 628
Pathway
phyl02020
Two-component system
phyl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HB779_06395 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HB779_06395 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyl03021
]
HB779_06395 (rpoN)
Transcription machinery [BR:
phyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HB779_06395 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_36
Arg_repressor
Phage_CII
HTH_21
Motif
Other DBs
NCBI-ProteinID:
QND51570
UniProt:
A0A7G6SAN8
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All DBs
Position
976160..977824
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AA seq
554 aa
AA seq
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MALSPKLDLRQTQSLVMTPLLMQSIRLLQLTHVELEQFIELEIEKNPLLERDDTAPDHIS
FESRDFSDDRGPGEAGDYNRNVLSGDSEGNADGSGSSDQGEHWLVSGESTSSGSMSDTFD
SSLENIFPDDPGTHDFIAGDLASQWKSSSGDGYVSSGGEGFNLEQVTAAPLTLRDHVGEQ
IIFAFEKAADRLVAAELADHLDEMGYLRADVAEIAERLGVEAADVEKLIAILQTFEPAGL
FARDLAECLAIQLRAKNRLDPAMAALLQNLELLAKRDFQTLKKLCRVADGDLLDMLQEIR
LLDPKPGTAFSSGVADSIIPDVEVDMAPDGTWSIELNPDALPRVLVNNTYYASIAKVTAS
PAEKGFLSECLQNANWLTRSLDQRAQTILKVATEIVRQQSEFLQFGVAHLKPLNLRNVAD
AIGMHESTVSRVTANKYMLTKRGVFELRYFFNAAISAMDGGEQHSSQSVRHQIKLLIDNE
KPEDILSDDTIVDLLKDQGVDIARRTVAKYREAMNIASSVQRRREKKAQASVRKGDGNSG
FIRHTGVESRRVGR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtcgccaaaactcgatctcaggcaaacacagtcgctggtgatgacgccgttg
ctcatgcagtcgattcggctgttgcaactgacgcatgtcgagcttgaacaattcattgag
ctggagattgaaaagaaccctctgctggaacgcgacgacacggcccccgatcatatttct
tttgaaagccgggatttttccgatgatcgcggtccgggtgaggccggtgactacaatcgc
aatgttctatccggtgattccgagggaaatgctgacggctccggttcgagcgatcagggc
gagcattggcttgtcagtggagaatcgaccagttcgggctcgatgtccgatacatttgac
agctcgctcgagaatattttccccgatgatcccggcacgcacgatttcattgccggcgac
ctggcgtcccagtggaagtcgtcatccggcgacggctatgtctcgtctggtggtgaaggc
ttcaatctggagcaggtgactgccgcgccattgaccttgcgcgaccatgttggtgaacag
atcatttttgccttcgagaaggcggccgaccggctggtcgcagccgagcttgcggatcat
cttgatgaaatgggatatctgcgcgctgatgtggctgaaatcgccgaaaggcttggggtt
gaagcggctgatgtcgaaaaattgatcgccatcctgcaaacctttgaaccagctggcctg
tttgcgcgcgaccttgcggagtgccttgcaattcaattgcgggcaaaaaaccggcttgat
cccgccatggccgcgcttctgcagaatctggaacttctggcaaagcgggatttccaaacc
ttgaaaaagctgtgccgtgttgctgacggcgatcttctcgacatgctccaggagattcgt
cttctggatccaaagccgggaacggcattttcctcgggggtggcggacagcatcattccc
gatgtcgaggtggatatggcaccggacggcacatggagcattgagctcaatccggatgct
ttgccgcgcgtactggtcaataacacctattatgccagcatcgccaaggtgacggcatcg
cccgccgagaaaggttttctcagtgaatgcctgcaaaatgccaactggctgacgcgcagt
cttgaccagcgagcccagacaatcctgaaagtggcgacagaaatcgtgcgccagcaatcg
gagtttctacagtttggcgtggcgcatctgaagccgctcaacctgcgaaatgttgccgat
gccatcggcatgcacgaatcgacggtcagccgcgttaccgccaacaaatatatgctgacc
aagcgcggtgttttcgagttgcgctactttttcaatgccgcaatttcggcgatggatggc
ggcgaacagcattcttcacagtctgttcggcaccagatcaagctgctgatcgacaatgaa
aaacccgaagatattctttccgatgatacaattgtggatcttttgaaggatcaaggcgtt
gatattgcacgccgcacggtcgcgaaataccgcgaggcgatgaacattgcttcctctgtc
caaaggcggcgcgagaaaaaagcacaggcttctgtgcgcaagggtgacggaaactctgga
ttcatacgccacacaggtgtagaatcgcgacgagtgggtagatga
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