KEGG   Phyllobacterium sp. 628: HB779_06395
Entry
HB779_06395       CDS       T08362                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
phyl  Phyllobacterium sp. 628
Pathway
phyl02020  Two-component system
phyl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:phyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HB779_06395 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HB779_06395 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyl03021]
    HB779_06395 (rpoN)
Transcription machinery [BR:phyl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HB779_06395 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_36 Arg_repressor Phage_CII HTH_21
Other DBs
NCBI-ProteinID: QND51570
UniProt: A0A7G6SAN8
LinkDB
Position
976160..977824
AA seq 554 aa
MALSPKLDLRQTQSLVMTPLLMQSIRLLQLTHVELEQFIELEIEKNPLLERDDTAPDHIS
FESRDFSDDRGPGEAGDYNRNVLSGDSEGNADGSGSSDQGEHWLVSGESTSSGSMSDTFD
SSLENIFPDDPGTHDFIAGDLASQWKSSSGDGYVSSGGEGFNLEQVTAAPLTLRDHVGEQ
IIFAFEKAADRLVAAELADHLDEMGYLRADVAEIAERLGVEAADVEKLIAILQTFEPAGL
FARDLAECLAIQLRAKNRLDPAMAALLQNLELLAKRDFQTLKKLCRVADGDLLDMLQEIR
LLDPKPGTAFSSGVADSIIPDVEVDMAPDGTWSIELNPDALPRVLVNNTYYASIAKVTAS
PAEKGFLSECLQNANWLTRSLDQRAQTILKVATEIVRQQSEFLQFGVAHLKPLNLRNVAD
AIGMHESTVSRVTANKYMLTKRGVFELRYFFNAAISAMDGGEQHSSQSVRHQIKLLIDNE
KPEDILSDDTIVDLLKDQGVDIARRTVAKYREAMNIASSVQRRREKKAQASVRKGDGNSG
FIRHTGVESRRVGR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggccctgtcgccaaaactcgatctcaggcaaacacagtcgctggtgatgacgccgttg
ctcatgcagtcgattcggctgttgcaactgacgcatgtcgagcttgaacaattcattgag
ctggagattgaaaagaaccctctgctggaacgcgacgacacggcccccgatcatatttct
tttgaaagccgggatttttccgatgatcgcggtccgggtgaggccggtgactacaatcgc
aatgttctatccggtgattccgagggaaatgctgacggctccggttcgagcgatcagggc
gagcattggcttgtcagtggagaatcgaccagttcgggctcgatgtccgatacatttgac
agctcgctcgagaatattttccccgatgatcccggcacgcacgatttcattgccggcgac
ctggcgtcccagtggaagtcgtcatccggcgacggctatgtctcgtctggtggtgaaggc
ttcaatctggagcaggtgactgccgcgccattgaccttgcgcgaccatgttggtgaacag
atcatttttgccttcgagaaggcggccgaccggctggtcgcagccgagcttgcggatcat
cttgatgaaatgggatatctgcgcgctgatgtggctgaaatcgccgaaaggcttggggtt
gaagcggctgatgtcgaaaaattgatcgccatcctgcaaacctttgaaccagctggcctg
tttgcgcgcgaccttgcggagtgccttgcaattcaattgcgggcaaaaaaccggcttgat
cccgccatggccgcgcttctgcagaatctggaacttctggcaaagcgggatttccaaacc
ttgaaaaagctgtgccgtgttgctgacggcgatcttctcgacatgctccaggagattcgt
cttctggatccaaagccgggaacggcattttcctcgggggtggcggacagcatcattccc
gatgtcgaggtggatatggcaccggacggcacatggagcattgagctcaatccggatgct
ttgccgcgcgtactggtcaataacacctattatgccagcatcgccaaggtgacggcatcg
cccgccgagaaaggttttctcagtgaatgcctgcaaaatgccaactggctgacgcgcagt
cttgaccagcgagcccagacaatcctgaaagtggcgacagaaatcgtgcgccagcaatcg
gagtttctacagtttggcgtggcgcatctgaagccgctcaacctgcgaaatgttgccgat
gccatcggcatgcacgaatcgacggtcagccgcgttaccgccaacaaatatatgctgacc
aagcgcggtgttttcgagttgcgctactttttcaatgccgcaatttcggcgatggatggc
ggcgaacagcattcttcacagtctgttcggcaccagatcaagctgctgatcgacaatgaa
aaacccgaagatattctttccgatgatacaattgtggatcttttgaaggatcaaggcgtt
gatattgcacgccgcacggtcgcgaaataccgcgaggcgatgaacattgcttcctctgtc
caaaggcggcgcgagaaaaaagcacaggcttctgtgcgcaagggtgacggaaactctgga
ttcatacgccacacaggtgtagaatcgcgacgagtgggtagatga

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