Phyllobacterium sp. 628: HB779_07415
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Entry
HB779_07415 CDS
T08362
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phyl
Phyllobacterium sp. 628
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyl03016
]
HB779_07415 (truB)
Enzymes [BR:
phyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HB779_07415 (truB)
Transfer RNA biogenesis [BR:
phyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HB779_07415 (truB)
Prokaryotic type
HB779_07415 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QND51751
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All DBs
Position
1188625..1189599
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AA seq
324 aa
AA seq
DB search
MSRQRKKKGRPVSGWLIFDKPKGMGSTEAVSKIKWLFKAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVMDGTKIYRFTVTWGAERTTDDMEGEITVTSDNRPDAAAIQAILPAYTGVI
QQIPPKFSAIKIAGERAYDLARGGEEVEIPAREVEIDRLDLIEQPDASTAIFEVECGKGT
YVRSLARDMGRELGCYGHISDLRRIEVAPFNEQDFVTLEELEAAHPPAPAEDEEGGDHSY
DAIVARFSVMDAFLIDTGAALESLPQVALSDDQAHRIRMGNPVILRGRDAPVEADKACVT
SKGKLLAIGFIEHGQFNPKRVFTI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacagcgcaagaaaaaaggccggcccgtatccggctggctgatctttgacaag
ccgaaaggcatgggatcaaccgaagctgtttcgaagatcaaatggctgttcaaagccgaa
aaggccgggcatgcgggaacgctggatcccctcgcgtcgggcatgttgccgattgcgttg
ggcgaagcgaccaaaacggttccctacgtcatggatggcactaaaatctaccgttttact
gtcacgtggggtgccgagcgcactaccgatgacatggaaggcgagatcaccgtaacctcg
gacaatcgtccggatgcggcggcaatccaggctattttacctgcctatacgggtgtgatc
cagcagatcccgccaaagttttccgccatcaagatcgccggcgagcgtgcttatgatctg
gcgcgtggcggcgaagaggtcgaaattcctgcgcgtgaagtcgaaatcgatcgcttggat
ttgatcgaacaaccggacgcgtcgacggcaatatttgaagtcgagtgcgggaagggcacg
tatgtgcgttcgctcgcccgtgatatgggccgcgagcttggctgctatggccatatttcc
gatctgcgccgtatcgaggtcgctccgttcaacgagcaggattttgtcacgctcgaagag
ctggaagccgcacatccgcccgcgcctgccgaggacgaggaaggcggcgatcattcctat
gacgctatcgtcgcacgcttttccgtgatggatgcatttctgattgatacaggtgcggca
ctcgagagtttgccgcaggtggcactgtccgatgatcaggcccaccgcatccgcatgggc
aatccggtcattctgcgtggccgcgacgcgcctgtggaagcggataaagcctgcgtaacc
agcaagggcaagcttctggctatcggctttatcgaacacggccagttcaatccaaagcgc
gtgtttacgatctaa
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