KEGG   Phyllobacterium sp. 628: HB779_13950
Entry
HB779_13950       CDS       T08362                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
phyl  Phyllobacterium sp. 628
Pathway
phyl02024  Quorum sensing
phyl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HB779_13950 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HB779_13950 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyl03019]
    HB779_13950 (hfq)
   03036 Chromosome and associated proteins [BR:phyl03036]
    HB779_13950 (hfq)
Messenger RNA biogenesis [BR:phyl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HB779_13950 (hfq)
Chromosome and associated proteins [BR:phyl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HB779_13950 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: QND52886
LinkDB
Position
2524142..2524387
AA seq 81 aa
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEAEAEDSD
NT seq 246 nt   +upstreamnt  +downstreamnt
atggctgaacgatcgcagaatcttcaggatctttttctgaactccgtcagaaaacagaag
atttctctgacaattttcctcattaacggcgtcaaactgaccggtattgtcacctcgttc
gacaatttctgcgtgctgttgcgccgcgacggccattcccagctcgtttacaaacacgcc
atctcgactatcatgccgagccagcctgtacagatgttcgaagctgaggccgaagacagc
gactga

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