Phyllobacterium sp. 628: HB779_13950
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Entry
HB779_13950 CDS
T08362
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
phyl
Phyllobacterium sp. 628
Pathway
phyl02024
Quorum sensing
phyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HB779_13950 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB779_13950 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyl03019
]
HB779_13950 (hfq)
03036 Chromosome and associated proteins [BR:
phyl03036
]
HB779_13950 (hfq)
Messenger RNA biogenesis [BR:
phyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HB779_13950 (hfq)
Chromosome and associated proteins [BR:
phyl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HB779_13950 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
QND52886
LinkDB
All DBs
Position
2524142..2524387
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AA seq
81 aa
AA seq
DB search
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEAEAEDSD
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgatcgcagaatcttcaggatctttttctgaactccgtcagaaaacagaag
atttctctgacaattttcctcattaacggcgtcaaactgaccggtattgtcacctcgttc
gacaatttctgcgtgctgttgcgccgcgacggccattcccagctcgtttacaaacacgcc
atctcgactatcatgccgagccagcctgtacagatgttcgaagctgaggccgaagacagc
gactga
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