KEGG   Phyllobacterium sp. 628: HB779_15040
Entry
HB779_15040       CDS       T08362                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
phyl  Phyllobacterium sp. 628
Pathway
phyl00010  Glycolysis / Gluconeogenesis
phyl00020  Citrate cycle (TCA cycle)
phyl00260  Glycine, serine and threonine metabolism
phyl00280  Valine, leucine and isoleucine degradation
phyl00310  Lysine degradation
phyl00380  Tryptophan metabolism
phyl00620  Pyruvate metabolism
phyl00630  Glyoxylate and dicarboxylate metabolism
phyl00640  Propanoate metabolism
phyl00670  One carbon pool by folate
phyl00785  Lipoic acid metabolism
phyl01100  Metabolic pathways
phyl01110  Biosynthesis of secondary metabolites
phyl01120  Microbial metabolism in diverse environments
phyl01200  Carbon metabolism
phyl01210  2-Oxocarboxylic acid metabolism
phyl01240  Biosynthesis of cofactors
Module
phyl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
phyl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phyl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
phyl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:phyl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HB779_15040 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HB779_15040 (lpdA)
   00620 Pyruvate metabolism
    HB779_15040 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HB779_15040 (lpdA)
   00640 Propanoate metabolism
    HB779_15040 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HB779_15040 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HB779_15040 (lpdA)
   00310 Lysine degradation
    HB779_15040 (lpdA)
   00380 Tryptophan metabolism
    HB779_15040 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HB779_15040 (lpdA)
   00670 One carbon pool by folate
    HB779_15040 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyl04147]
    HB779_15040 (lpdA)
Enzymes [BR:phyl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HB779_15040 (lpdA)
Exosome [BR:phyl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HB779_15040 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like DAO NAD_binding_8 GIDA FAD_binding_2 FAD_binding_3 UDPG_MGDP_dh_N Lys_Orn_oxgnase FAD_oxidored 3HCDH_N XdhC_C AlaDh_PNT_C TrkA_N NAD_binding_7
Other DBs
NCBI-ProteinID: QND53070
UniProt: A0A7G6SEY8
LinkDB
Position
complement(2724885..2726282)
AA seq 465 aa
MKDISCKLLVIGAGPGGYVCAIRAGQLNVDTVIVEAAKVGGTCLLVGCIPSKALIHAADE
FAKVAHFAVGQTPLGISVGEPAIDFSKTIAWKDGIVSRLNNGVAGLLKKANVKIVTGRAS
FRDGKTVEVETLTGQQIIRAENVVIATGSAPVEVPSLPFGGNVISSTKALSLQQVPEKLV
VVGGGYIGLELGTAFAKLGSKVTVVEAQSKVLPQYDAELTRPVVKHLNELGITVLTGAKA
KGVSTKGDALLIETADGKDDRIAADKILVTVGRKPVTSGWGLEEIDIDMDGRFVRIDDKC
RTSMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIIAGENRSWDKRAIAAVCFTDPEIVSVG
LSPDEAKQAGHEIKIGMFPFAANGRAMTKEGEEGFVRVVAAAGNHLILGIQAVGHGVSEL
SASFALAMEMGARLEDIAGTIHAHPTQGEGFQEAALKALGHALHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaaagatatttcctgcaagctgctggtcatcggcgctggccccggcggttatgtctgt
gccattcgcgctggacaactcaatgtcgatacggtgatcgttgaagcggccaaggtcggc
ggtacatgcctactggttggctgtattccgtcgaaggcactcattcatgccgctgacgaa
tttgccaaagttgcgcatttcgccgtgggacagacaccgttgggtatttcggtgggtgaa
cctgccatcgacttttccaagacgattgcctggaaagacggcatcgtcagccgcctcaac
aatggcgttgccggtctgttgaagaaggccaatgtcaagatcgtcacgggccgggcaagc
ttccgcgatggcaagacggtcgaggttgaaaccctcaccggtcaacagattatccgcgcg
gaaaatgtggtgatcgcgacgggttcggcaccggttgaagtgccgtcgctgccgtttggt
ggcaatgtgatctcatcaactaaagcattgtcgctgcagcaggtgcctgaaaagctcgtt
gttgtcgggggcggttatatcggccttgaactgggcacggcctttgccaaactgggttcg
aaggtgacggtggtcgaggcgcagtcgaaggttcttccgcaatatgatgcggaattgacc
cgtccggttgtcaaacatctgaacgagcttggtatcaccgttttgaccggcgcgaaggcc
aagggtgtcagcaccaagggcgatgctctgctgatcgagacggcggatggcaaggatgac
aggattgctgccgacaagatcctcgtgacggtcgggcgcaagccggtcacatctggctgg
ggtctcgaagagatcgacatcgatatggacggccgctttgtccgcatcgatgacaagtgc
cgcacgtccatgcgcggcgtctatgcaattggcgatgtgacgggtgagccaatgctggcg
catcgtgccatggcgcagggcgaaatggttgccgaaatcatcgctggcgaaaaccgcagt
tgggacaagcgcgccattgctgctgtttgcttcaccgatccggaaattgtttcggtggga
ttatcgcctgatgaagcaaagcaggccggtcacgagatcaagattggtatgttcccgttt
gctgccaatggccgcgccatgaccaaggaaggcgaggagggtttcgtgcgggttgttgcc
gctgccggaaaccatctcatccttggcattcaggcggtgggacatggcgtctccgagctc
tcggcttcctttgcacttgctatggaaatgggtgcgcggctggaggatattgccggaacc
attcatgcgcacccgacgcagggcgagggttttcaggaagcagcgctcaaggcgctgggc
cacgcgctgcatatctaa

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