Phyllobacterium sp. 628: HB779_22565
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Entry
HB779_22565 CDS
T08362
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
phyl
Phyllobacterium sp. 628
Pathway
phyl00260
Glycine, serine and threonine metabolism
phyl00630
Glyoxylate and dicarboxylate metabolism
phyl00670
One carbon pool by folate
phyl00785
Lipoic acid metabolism
phyl01100
Metabolic pathways
phyl01110
Biosynthesis of secondary metabolites
phyl01200
Carbon metabolism
Module
phyl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HB779_22565 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HB779_22565 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HB779_22565 (gcvP)
00670 One carbon pool by folate
HB779_22565 (gcvP)
Enzymes [BR:
phyl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HB779_22565 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QND54716
UniProt:
A0A7G6SJN4
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All DBs
Position
p_2:complement(422593..425391)
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AA seq
932 aa
AA seq
DB search
MKDTIFPFADRHIGPSIQGSRAMLAALGIPSLETLIAQAVPKSIRLERPLDIPEAVNESE
ALAELAAKMGQNKTHKSFIGQGYHGTHVPAVILRNLFENPAWYTAYTPYQSEISQGRLEL
LFHFQTLVTELTGLPVASASLLDEATAVAEAVGIAYRHHREKRTRVVLAGALHPQTVDVV
KTRAEPLGMSVDEGAIDATVAAVLVPWPDTFGVYGDHSAVIQAAKAAGALVVAVADPLAL
TITTPPAKAGVDIAAGSMQRFGVPIGYGGPHAAYLAVSETLTRLIPGRLVGQSVDSKGRA
GYRLALQTREQHIRRDKATSNICTAQALLANMAVSYAIWHGPQGLQAIARGVHTQAARLA
AALTGAGFTIAGSHFFDTVTVTVPGKAASIAAKAEEGGRLLRIIDQDRLGVTVDETTSED
DLKALVALFGASLPAEANATLPGERQAEGFMTQAVFHQQRSETEMMRFLRRLADKDLALD
RAMIPLGSCTMKLNAAAEMLPVSWQSVANVHPFAPANHALGYKSMIDDLDNWLSEITGFD
AVSLQPNAGSQGEYAGLLAIRRYHLDRGDAHRDICLIPESAHGTNPASAHMAGMRVVVVA
CEEAGDIDLDDLKAKAELHSANLAALMITYPSTHGVFEEGVKDICAVIHQHGGQVYFDGA
NLNALVGLARPGDIGADVCHMNLHKTFCIPHGGGGPGVGPIGVKKHLIPFLPGHVAKGSQ
HAVSAAPFGSASILPITWMYIRMMGGAGLKRATEMAILNANYIAERLKDYYPVLFKGQNG
RVAHECILDTRVLKDSAGISVEDIAKRLIDYGFHAPTMSWPIAGTLMVEPTESESKREID
RFCDAMILIAGEAEKVASGVWPREDNPLVNAPHTSGDVLADDWAHPYTRREASLPAGESE
ENPKYWPPVSRIDNVAGDRNLVCSCPPMQAYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaccatattcccattcgccgaccgccatatcggcccgagcattcagggctcg
cgcgccatgctggcagcgctcggcatcccatcgcttgagaccctgattgcgcaggctgtg
ccgaagtcgatccggctcgaacgcccactggatattcccgaagcggtcaacgagtcagaa
gctctggcggaactcgctgccaagatgggccagaacaagacccacaagagctttatcggt
cagggttatcacggcacgcacgtgcctgcggtcatcctgcgtaatcttttcgagaacccg
gcctggtacacggcttatacgccgtaccagtcggagatcagtcagggccgccttgagttg
ctgttccatttccagacgctggtgacggaactgacgggtctgccggttgcgtcggcctcg
ctgctcgacgaagcaacagctgtcgctgaagcagtaggcattgcctatcgccaccaccgc
gaaaagcgtacccgtgtcgtgcttgccggtgctctgcatccgcagacggtcgacgtggtg
aaaacccgtgccgaaccgcttggcatgagcgtggatgaaggcgcaatcgacgcgactgtc
gctgcagtgcttgttccatggccggatacattcggcgtctatggcgatcacagcgcggtc
attcaggccgccaaggctgccggagcgctggttgtggcggttgccgatccgctggcgctg
acaatcaccaccccgcccgccaaggcaggcgttgatatcgctgccggttccatgcagcgc
tttggtgtgccgatcggttacggcggcccgcatgcggcctatctggcggtcagcgaaaca
ttgacgcggcttattccggggcgtctggttggtcagtcggtcgatagcaagggccgagca
ggttaccgccttgccctgcagacccgcgaacagcatatccgccgtgacaaggcgacatcc
aacatctgcacagcacaggcgctgctcgccaacatggcggtatcctatgccatctggcac
ggaccgcaggggctgcaggcaatcgcacgcggcgtccacacacaggctgcccgccttgct
gcggcactgacaggcgctggctttaccattgccggatcgcatttcttcgacacggtgacg
gttactgttcccggcaaggctgcatcgattgctgccaaggcggaagagggcggacggctg
ctgcggatcatcgatcaggatcgtcttggcgttacggtcgatgaaacaacgtcggaagat
gatctgaaggcgctggttgcgctgtttggtgcgagtttaccggctgaagccaacgcaact
ttgcctggcgaacggcaggctgaaggtttcatgacccaggctgtgttccatcagcagcgt
tccgaaaccgaaatgatgcggttcctgcgccgtctggccgacaaggatctggcgcttgac
cgcgcgatgatcccgcttggatcgtgcacgatgaagctcaatgccgctgcagaaatgctg
ccggtcagctggcagagcgttgccaatgtgcatccctttgcaccggctaatcatgcgctt
ggctacaagtcgatgattgatgatctggacaattggctttcagaaatcaccggctttgat
gctgtttcgttgcagcccaatgccggcagccaaggtgaatatgccgggcttctggccatc
cgccgctatcatctcgaccggggcgatgcgcatcgcgatatctgcctcattccggaatcg
gcacacggcaccaatccggccagtgcccatatggccggcatgcgcgttgtcgtggttgcc
tgcgaagaggctggcgatatcgatcttgatgatctgaaagccaaggcggagctgcacagc
gccaatctcgctgcgctgatgatcacctacccatcgacccacggcgtgttcgaagaaggc
gtcaaggatatctgtgcggtcatccatcaacatggcggtcaggtttatttcgacggtgcc
aacctcaatgcgctggtcgggcttgcccgtccgggcgatattggtgctgacgtctgtcac
atgaacctgcacaagaccttctgcattccgcatggcggcggcggtccgggtgttggtccg
atcggcgtgaagaaacatcttattccgttcctgccgggccatgtggccaagggatcgcag
catgcggtttcagcggctcccttcggcagtgcttccattcttcccatcacatggatgtat
atccgcatgatgggcggagcagggctcaagcgtgcaacggaaatggccattctcaatgcc
aactacattgctgaacgcctgaaggactattatccggttctgttcaagggccagaacggc
cgtgtggcgcatgaatgcattctcgatacccgtgttctgaaagatagcgccgggattagc
gtcgaggacattgccaagcgcctgatcgactacggtttccacgcaccgaccatgtcctgg
ccgattgccggaacgctgatggttgagccgacggagtcggaatccaagcgggagatcgac
cggttctgcgatgcgatgatcctgattgccggagaagcggaaaaggttgctagcggtgtc
tggccgcgcgaggacaatccgctggtcaacgcaccgcatacgtcgggcgatgttctggcc
gatgattgggcacatccttatacccgccgggaagccagccttcccgcaggcgagagcgag
gagaacccgaaatactggccgccggtatcgcgtatcgacaatgtggcgggtgaccgcaat
ctggtctgctcgtgcccgcccatgcaggcctacagctaa
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