Pangasianodon hypophthalmus (striped catfish): 113523653
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Entry
113523653 CDS
T05759
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113523653 (rhbdl3)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
113523653 (rhbdl3)
Peptidases and inhibitors [BR:
phyp01002
]
Serine peptidases
Family S54: Rhomboid family
113523653 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
113523653
NCBI-ProteinID:
XP_026765441
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MTTGARANSSPAVAAHAEGEEIEVLESGDTETGTHADTEWKSLFDKYDPESSGFISAERL
RDLLETHGSELDAHKLEVLLALANGNAEGKVRYQDFINLVSPERYPQCSGGTADSTDRMS
NKRSNSFRRAIQQGGRQLKSSSLREEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYC
PPPWLILTITIAEMVVFVYYGLLLDRWVLQVSSPSFLKSPLPYHPQRRAQAWRYLSYIFM
HAGIEHLGLNMAMQLLVGVPLEMVHGAARIGLIYVCGVLAGSLVVSVVDMAAPVVGSSGG
VYALVSAHLANVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAVPPCPNPSF
CAHLGGVAVGLTLGVVVLQNYEQRLHEQFLFWIFISVYGLFVLFGIFWNVFAYSLLDVKL
PPAP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggagcgcgcgccaactcatcaccggcggtggcggcgcacgcggagggcgaa
gagatcgaagtgttagagagcggagacaccgagaccggaactcacgcggacacagagtgg
aaatctctgtttgataagtatgacccggaaagttcgggcttcatcagcgccgagcgtttg
cgtgacctgctcgagacgcacggctctgaactcgacgcacacaagctggaggttctgctg
gcgctggccaacgggaacgctgagggaaaagtccgatatcaggatttcatcaacctggtg
agtccggaacgttacccacaatgctctgggggaacagctgactccactgatcggatgagt
aataagcggtcgaacagtttccggcgcgcgatccagcagggagggaggcagctgaagagc
tccagcctgcgggaggaggtgggactcggtttgtctcagagactcgtccgacacgtagcg
tacgagacgctgcctcgggaagtggaccgcaagtggtacttcgacagctacacctactgt
cctccaccctggctcatcctgaccatcaccatcgcagagatggtggtgtttgtgtattat
ggtctcctgctggatcgctgggttcttcaggtttcctctccgtccttcctgaagagccct
ctgccctaccaccctcagcgtagagcgcaggcctggcgctacctcagctacatcttcatg
cacgctggcatcgagcacctgggtctgaacatggccatgcagctgctggttggtgttcct
ctggagatggtgcacggagccgccaggatcggcctcatctacgtgtgcggtgttctcgca
ggttctctggtcgtatctgtggtagacatggctgcccccgtagtcggttcatcaggagga
gtttacgccctcgtctccgcccacctcgccaacgttgtcatgaactggtcagggatgaag
tgtcagtttaaattgttccggatggcgatggcgctggtctgcatgagcgtggagttcggc
cgcgctgtgtggttgaggttttacccccccgccgtgcctccgtgccccaacccgagtttc
tgcgcccacctgggcggggtggcggtgggcctgacgctgggcgtggtcgtgctgcagaac
tacgagcagcgtctgcatgagcagttcctcttctggatcttcatcagcgtctacggcctc
ttcgttctcttcgggatcttctggaacgtcttcgcttatagcctgctggacgtcaaactc
ccgccagcaccatga
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