Pangasianodon hypophthalmus (striped catfish): 113523676
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Entry
113523676 CDS
T05759
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113523676
03036 Chromosome and associated proteins [BR:
phyp03036
]
113523676
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113523676
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113523676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
M_domain
Ago_hook
UBA_7
UBA
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
113523676
NCBI-ProteinID:
XP_026765470
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MVALITNDKLYSFNEMKPEVLPNQSGLGAQHENLLWGNPTTTRSSCTNSNQVIIDEKDTE
TRTSSSPESLECVLDADTSAVVNSSMSMATGASQHSHYPISKASVNHSSSMFSSQGGPNR
GWASEGKPDLSMGTRGQSNWGSSNINLNPSANPAAWPVLGHDGPGVGTRPGGMGGSSSVP
SNVCGPGGVAPIQGTNGNGNLVGDCAWGNPDTPEQHQSPKSMTFSMEPPNLKTDGLNTKT
EPMSPADGWGRNMSQSPTEPATEDGTARWGNGDAKSGESKDSGWDSGGISSWGQGGGEAN
WGHWSKQSSTEGTRWDANDGPTQESMNSWGTDAPGSEGSKDSSEGRESQRERSSSMDVPL
LPRQDLDPRVLCNSGWGQTPVRQHTVWEMDENLGSKDEGGTEAWGTSSNAPSTGSPPHAG
CANPNLNVPPRMDSGSKTEGLSRVMPTPRWGGSSSPTNQASTGWGEPPANKKVSNGSVGS
WGEPVPDGPSTNGSSGQFWGSEDKSSTWDDGPSQVKAQPGGNGHSSSSGWGNCASGDWGE
PSEGRMEGSRTSSWDGDGGSWKETQKGWGKAAPPGGENWRDSQRPNGPVQGWGGKNPQES
MGSWGGPNSVKQSGSGWRSTGRQDPGDEATGWEEPSPSSIRRKMEIDDGTATWGDPNSYR
TCVNMWDRNNPSSQGNPATSNNGGNSINHTGPNHHSHSQTPNHSDGKSNGSPNQLGPPQN
RMPKVNPSWGELPNVQPKSESWGEPDSSSPTVDNGTAAWVKSPKAAGVWGENSHESSGTF
GRGSGTSKPAPKSMQDSWGSGGEEISVSSSQWDAEDGDMWTSPTSQDNTSSCSSWNQPKK
GLQKGKIPTKQDEVWIMNRLIKQLTDMGFPRDPAEEALRSNNMNLDQAMSALLEKKSDGE
KRGMRTLLCRPPNLSKDSSLDRTAFLDKDGGLSDDTPTSPFIHSPGLKLTNSSLPSHGMG
GVSPGLMQNMNSRQMNGMFGSNGAAQSRAPPPQALNSAHHPPLRAQVPQFLSPQVQAQLL
QFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMVRDGMGEGMGEGGTDGGSKLLDMKST
WSTGSVSHTQASLSNEMWKIPVGGRSSGTVPRPPPGLTNNKHNSNWTPGLLSNSWSRDYS
SVHFSISSLILFRFPSLALLCVLGNTTILAEFAGEEEVTRFFSQAQSFPPSGSSTHPALG
QWGTSTTKGGSNPGGGANGSGAELLWGGVQQPYSSLWGPINGEESRVMGSPVPVNTLLPG
DLLNGENM
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgttgatcacgaatgataaattatacagctttaatgaaatgaagcctgaagtg
ctgcccaatcagagtggcctgggagcccagcatgagaatttgctttggggcaatccaacc
accacccgcagcagctgtaccaattcgaatcaagtgattattgatgaaaaggacactgaa
actcggacttccagttccccagagtcattagaatgtgtattggatgctgacacgtcagca
gtcgtgaatagcagcatgagtatggctacaggagctagccaacacagccactacccaatc
agcaaagccagtgttaatcactcctcaagtatgttctctagtcagggtggccccaacagg
ggttgggcctctgagggcaaacctgatttgtccatgggtaccagaggccagtccaattgg
ggctcttcaaatataaacttgaaccccagcgctaaccctgccgcgtggcccgtactcgga
catgatggcccaggggtggggaccaggcctgggggtatgggtgggtcaagttcagtccca
tccaatgtctgcggcccaggaggcgtcgcacctattcaaggcaccaatggaaatggaaac
cttgtaggagactgtgcttggggaaacccagacaccccggagcagcaccagtccccaaaa
agcatgactttcagcatggagcccccgaaccttaaaactgatggattgaacactaaaaca
gagccaatgagccctgctgatggttgggggagaaatatgagtcagtcacccactgagcca
gccactgaagatggtactgctcggtggggtaatggagacgccaagagtggagaatcaaaa
gactcaggctgggattctggtggcatctcctcttggggacaggggggaggtgaggcaaac
tggggccattggagcaaacagtcaagcaccgaaggtaccaggtgggatgcaaatgatggt
cccactcaggagtcaatgaattcctgggggactgatgctccaggcagcgaaggtagcaag
gacagcagtgaaggacgtgaaagtcagagagaaaggtcctccagtatggatgttccactt
ctgccaaggcaggacctagatcctcgtgtgctgtgcaactccggctggggacaaacccct
gtccggcagcatacagtctgggaaatggatgaaaatcttggctccaaggatgagggtggc
actgaagcttggggtacttcctctaatgcaccttcaactggatcaccacctcatgcagga
tgtgccaatcccaacctaaatgtacctcctaggatggactctgggagcaagactgagggg
ctttctcgagttatgccaacaccacgctggggaggatcatcctcaccaacaaatcaagca
agcactgggtggggagagccacctgctaataagaaagtgtccaatggctctgttggtagt
tggggtgagccagtgccagatggccccagcaccaatggttctagtggccagttttgggga
tcagaggacaagtcttcaacctgggatgatggtccttcccaagtaaaggcacaacctgga
ggaaatgggcatagttcttcctcaggctggggaaattgtgcaagtggagattggggagag
ccttcagaagggaggatggaaggttcacgtacttcctcttgggatggagatggagggagc
tggaaggaaacccagaagggctgggggaaagcggctccaccaggaggtgaaaattggcgt
gactcgcaacgcccaaatggtcctgtacagggttggggtggaaagaatcctcaagaatcc
atggggtcttggggtggcccaaactctgtgaagcagagtggttctggctggaggtctaca
ggaaggcaggatccaggggacgaggctacaggctgggaagagccttccccttcctcaatc
cgaaggaaaatggagattgatgatggaactgccacttggggagatcctaattcctacaga
acctgtgtaaacatgtgggacagaaataacccctcctcccagggcaacccagctaccagc
aacaatgggggcaacagcatcaaccatacagggcctaaccaccacagccacagtcagact
ccgaaccactctgacggcaaaagcaatggttctcctaaccagctaggacctcctcaaaat
aggatgcccaaggtgaacccaagctggggggagctccccaatgttcagcccaaatctgag
tcctggggggaaccggattcctcgagccccacggtggataacggcactgctgcctgggtg
aagtcccccaaagccgccggagtctggggagaaaacagccacgaatccagtggaaccttc
ggcagaggctcaggaacctccaaaccagcccccaaatctatgcaagacagctgggggtcc
ggcggggaggagatcagcgttagcagcagccaatgggatgctgaggatggggacatgtgg
actagccccacctcccaggacaacacttcttcctgtagttcctggaatcagcccaagaaa
ggcctacagaaggggaaaatcccaaccaaacaggatgaagtttggatcatgaaccgactg
atcaagcagctcacggacatgggcttccctcgggatcctgcagaggaggcactgagaagt
aacaacatgaatctggaccaggctatgagcgctctgctggagaaaaagagcgatggagaa
aagcgagggatgaggacgctgttgtgtcgccctccaaacctctcgaaagactcgtcactg
gaccgaaccgccttcctggacaaggacggcggattatcggatgacacgcccacatcaccc
tttattcattctcctggcctcaaactgaccaatagcagccttcctagccacggcatgggc
ggagtctcaccaggactaatgcaaaacatgaacagcagacagatgaatggaatgtttggc
agtaatggagcagcacaatccagggctccgccccctcaagcactaaactccgcccatcat
cccccactacgtgctcaagtgcctcagtttctctcccctcaggttcaagcacagctcttg
cagtttgcagcaaaaaacattggcctgaatcctgcacttttaacctcaccgataaatcct
caacagatgaccctgctttaccaactccaacaactgcagatggtgagagacggaatggga
gagggaatgggagagggagggactgatggagggagtaaactcttagacatgaagtccacc
tggtctacaggttccgtctcacacactcaggcctcgctgtccaatgagatgtggaagatt
cctgtgggtgggcggagctctggaacagtgccacgccccccgccgggcctcactaataac
aaacacaacagcaactggacacctggactgctgagcaacagctggagcagagactactcc
tcagtccacttttctatctcttctcttatcctcttccgattcccttccttagccctgttg
tgcgttctgggtaacaccaccatcttggcggagtttgccggagaggaggaagtgactcgt
tttttctctcaggcccagtcgttcccgccctccggcagctccacccaccccgccctgggt
cagtggggcacgtcgaccactaaggggggcagtaacccagggggcggagctaacgggtcc
ggggcggagctgctgtggggcggagtccagcagccgtactccagtttatgggggccgatc
aacggagaggagagccgagtgatgggaagtcccgtccccgtgaacacgctgctccccgga
gacctgctgaacggagagaacatgtag
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