Pangasianodon hypophthalmus (striped catfish): 113523771
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Entry
113523771 CDS
T05759
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113523771 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113523771 (gtf2f1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
113523771 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
113523771
NCBI-ProteinID:
XP_026765609
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSRREYSHLTLTDPGIDPGSSAALPGIKRSLSAVLQSARWRSESQSQSESERKSRRFVVY
WSNRNTSKRYSIMAFNAGDKVNCSTWTQARMERDLSNRRMYGEEETPEGAAGSEFGKKQR
EEARRKKFGIVTREFKVEDQPYTVSYCNKSTVFRFKGQKKGGVTENASYYIFTQCADGAF
EAFPVHAWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQRRLKEQEHGEEEEEEG
EKGAKKKKKKKGGQGGDLRIHDLDDDLELSSDNSESSAGEDGEGRAKNKKENSSKAKGKK
KKKKKGSDAEGHEDSDDGDFEGLEVDYMSDESSSEEEEPEKVKPNKGEDVPKGIDEASES
EEESEEENKNEDEAKEEEDEEEGKKTPVQVEKKKKKDSSGESDSSEDSDIEGETASALFM
AKKRTPPKRGGRGSAGSSRAGSRPGTPSIDHAATSNTLRAAATKLEQGKRQATTSSSDTP
AAKRLKMEPTSQSPSGKSTPQPASGKSTPSSSDVQLTEEAVRRYLIRKPMTTKDLLKKFQ
TKRTGLSSEQTVNVLAQILKKLNPERKNINDKMHFYLTE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggagggagtattcccacctgacactcactgatcccgggatagacccgggatcc
tccgccgcgctgcccgggataaagcgctcgctgagtgcagtgctccagtccgccaggtgg
cgctcagagtcacagtcacagtcagagtcagagaggaagagccgcaggtttgtcgtgtat
tggtccaacaggaacacgagtaaaaggtacagcatcatggcttttaacgctggagacaaa
gtgaactgttccacatggactcaggctcggatggagcgggatctgagtaaccggaggatg
tacggagaggaggagacgcctgagggagctgctggcagtgagtttggtaaaaaacagagg
gaggaggcacgcaggaagaagtttgggattgtaacccgcgagtttaaggtggaggaccag
ccctatacggtcagttactgtaataagtcgactgtgttcaggtttaaggggcagaagaaa
ggaggagtgacggagaacgcttcatactacatcttcacgcagtgtgctgacggagcgttc
gaggcatttcctgttcacgcctggtacaacttcaccccggtggctaaacaccgcacgctc
accgccgaagaggccgaggaggagtggggcaggaggaataaagtggtgaatcacttcagc
atcatgctgcagcggcgactgaaggagcaggaacatggtgaggaagaggaggaagaggga
gaaaagggggcaaagaagaaaaagaagaagaaaggtggccagggaggagacctgcgtatt
catgatttagacgatgatctggagttgagcagtgataacagtgagagcagtgcaggagaa
gacggagaaggtcgggcgaagaataagaaggagaacagctcaaaggccaaggggaagaag
aagaagaagaagaagggcagtgatgcggagggacatgaggacagcgatgatggagacttt
gaaggtctggaagtggactacatgtcagatgagagcagttctgaggaagaggagccggag
aaagtgaagcctaataaaggagaggacgtgcctaaaggaattgatgaagcgtctgagagt
gaggaggagagtgaggaggagaacaagaatgaggacgaggcgaaagaggaggaggatgag
gaagaagggaagaaaacacctgtacaggtggagaagaagaagaagaaagacagcagcggc
gagtcggacagctccgaggacagcgacatcgagggagagacggcgtctgcgctcttcatg
gcgaagaagcgtactcctcctaaacgaggcggccgaggttctgctggaagttctagagca
ggaagtcgtcccggaacgccctccatcgaccacgctgccacctccaacacactgcgcgct
gcggccaccaaactggagcagggtaagcgtcaggcgacgacgtccagctcagacactccc
gctgccaagaggctgaagatggagccgacttctcagagcccgtcggggaagagcactcca
caaccagcatccgggaaatccacaccgagctccagtgacgtgcagctgacggaggaggcc
gtgcgccgttatctgatccggaagcccatgaccactaaagacctgctgaagaagttccag
actaaacgcacgggactgagcagcgagcagacggtcaacgtcctcgcacagatcctcaag
aagctcaacccagagaggaaaaacattaacgacaagatgcacttctacctcacggagtaa
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