Pangasianodon hypophthalmus (striped catfish): 113523799
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Entry
113523799 CDS
T05759
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
phyp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
phyp01100
Metabolic pathways
Module
phyp_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
113523799 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
113523799 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phyp01003
]
113523799 (xylt1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
113523799 (xylt1)
Glycosyltransferases [BR:
phyp01003
]
O-Glycan biosynthesis
Glycosaminoglycan
113523799 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
113523799
NCBI-ProteinID:
XP_026765668
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MMVGGPCARKSARRSRSALIAALTVLLVQTLIVWNFSSLDSGDAGENGGGAGAGGGAGGA
GGGGREKRDRLGVNKAYGEYPRSRRQQLGKATLRHKRQPDVYYSHRPKEKVRVDSNNENS
VPKDFESIDNSNFVARRASNKRQQETPEKAKSSNELVHYGLNRTEAGLRHDSALTPLPPR
HRHQQVKPSAVATPDIKYDQPPKCEITGKEAISALSRAKTKECRQQIAEVYCRHKDKQLM
PEKVTRYCPLEGKASVNVHWEEDSMETVPAVPVRIAFVLVVHGRASRQVQRLFKAIYHTS
HFYYIHVDQRSDYLHRQMLALAKRYPNVRVTPWRMSTIWGGASLLSMYLQSMKDLLAMSH
WPWDFFINLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFFECDT
HMWRLGDRKIPEGIAVDGGSDWFLLNRAFVEYIINSDDDLVTSMKRFYAYTLLPAESFFH
TVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQTARP
TFFARKFEASVNQEIVNQLDAFLFGSYPQGTPGLKAYWENIYDEPDGVHSLSDALLTHYH
AFARLGLARAANSLQGDASDNRCRYYAMGHPVAVHIYFLFDEFQGYLVKHHATNLATSKL
ETLETWVMPKKFFKFTNPPSNFNRLQFAEIGTDWDAKERIFRNFGNLMGPMDEPVGMQKW
AKGSNVTVTVVWIDPTNVIAATYDVLIDSTAEFTHYRPPLNTPLRPGMWTVRVLHHWNPV
AETRFLVTPLTHHKHLPIRQDDALKVHNGPAKNSYMEQSFHGLNPILNIPVHLGQVEEAE
HNAGLTGMRLERWVDSLVGEVWAAADVCSATPSGCPVLQSCRDTAWSSLSPDPKSQLGPP
KANGTIR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggcggtccgtgcgcgcgcaagtcggctcgccgctcgcgctccgcgctgatc
gccgcgctcaccgtgctgctcgtgcagacgctcatcgtgtggaacttcagcagcctggac
tcgggggacgccggggagaacggcggaggagctggagctggaggtggcgctggaggtgct
ggaggcggaggcagggagaagagagaccggctcggtgtcaacaaagcgtacggcgagtat
ccgagaagcaggaggcagcagctcgggaaggcgaccctgcgccacaagcggcaaccggac
gtctactactcacatcgtcccaaggagaaggtccgtgtggacagcaacaacgagaactct
gtgcccaaagacttcgagagcatcgacaacagtaacttcgtggcgcgtcgcgcctccaac
aagcggcagcaggagacgcccgagaaggccaagagctccaatgagctcgtccactacggc
ctgaatcgcacggaggcggggctccgtcatgactccgccctcacgccgctccctccacgg
catcgccaccaacaggtcaagccatcggccgttgccacgcctgatatcaaatatgaccag
ccgcccaaatgcgagatcacaggcaaggaggcgatctcggctctgtcgcgcgctaaaacc
aaggagtgcagacagcagatcgccgaggtgtactgtcgacacaaagacaagcagctcatg
cctgagaaagtcactcgctactgccccctagagggtaaggcgagtgtgaacgtgcactgg
gaggaggactccatggagacggtgccggctgtacctgtgcgcatcgccttcgtgctggtg
gtccacggccgagcatcgcgccaagtgcagcgtctcttcaaggccatttaccacacgtca
cacttctactacatccacgtggaccagcgctcagactacctccacaggcagatgctagcg
ctggctaagcgctacccgaacgtccgtgtgacgccctggcgcatgtcgaccatctggggc
ggagccagtcttctcagcatgtacctgcagagcatgaaggaccttctggccatgagccac
tggccctgggacttcttcatcaacctgagcgctgcagactaccccatcaggactaatgat
cagctggtggctttcctttccaagtaccgcaacatgaacttcatcaagtctcatgggaga
gataacgctcgattcatcagaaaacagggcctggaccggctcttcttcgagtgtgacaca
cacatgtggcgtctgggggacaggaagattccggaaggcatcgcggtggacggaggctct
gattggttcctgctgaaccgcgccttcgtggagtacatcatcaactccgatgacgacctg
gtgaccagcatgaagcgcttctacgcttacactctcttgccagccgagtcgtttttccac
acggtgctggagaacagtcctcactgcgagagcatggtggacaacaacctgcgtatcacc
aactggaaccggaaactgggctgcaagtgccagtataagcacatcgtggactggtgtggc
tgctcgcccaacgacttcaaaccctctgacctgccccgctttcagcaaacggcacggccc
acgttctttgcgcgcaagtttgaggccagcgtgaatcaggagatcgtgaatcagctggat
gccttcctgtttggaagctatcctcaaggcacgccaggactcaaagcctactgggagaac
atttatgatgaacctgatggtgtccacagcctgagtgatgccctgctcacccactaccat
gcgttcgcccgcctcggcctggcacgagccgccaactccctgcaaggagacgccagcgac
aaccgttgtaggtactatgctatggggcatcctgtggctgtccatatctacttcctattt
gatgagttccagggttacctggtgaagcatcacgccaccaatctggctaccagcaagctg
gaaactctggagacctgggtgatgcctaagaagttcttcaaattcaccaacccaccaagc
aacttcaacagactgcagtttgccgagattgggacagactgggatgctaaggagagaatc
ttccgcaattttggtaatctcatggggcctatggacgagccggtggggatgcagaagtgg
gccaaagggtccaatgtgacagtgacggtggtgtggattgaccccactaacgtgatcgca
gccacctacgacgtcttgatcgactccactgccgagttcacacactacaggcctccgctg
aacacaccactgcggcccggcatgtggactgtccgagtgctgcaccactggaaccccgtg
gccgagacacgcttcctcgtcacaccgcttacacaccataaacacctgcccatccgccaa
gacgacgccttgaaagtgcacaacggcccagccaagaacagctacatggagcagagcttc
cacgggctgaaccccatcctgaacatcccggtgcatttgggccaggtggaggaggcggag
cataatgccgggctgacgggtatgaggttggagcgctgggtggacagcctggttggcgag
gtgtgggcagctgcggacgtttgctcggcgacgccctctggctgtcccgtcctgcagtcg
tgcagagatacggcatggagctcgctcagccccgatcccaaatcacagctcgggcctccc
aaagctaacggcaccataaggtag
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