Pangasianodon hypophthalmus (striped catfish): 113523827
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Entry
113523827 CDS
T05759
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113523827 (vps52)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Others
EARP complex
113523827 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
113523827 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
113523827
NCBI-ProteinID:
XP_026765694
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MADDVVSTEAPAEGNTAVSSTTSAMDYLQDEKSDADVVPPLNLGDLDLSSDEFILDEVDI
HIQANLEDELVQEALRTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQITAC
DSILEVRSRDQGLFISQSHPSNSIMNIPMPERIFGIRLQPGYRPYTEFDVRVNAVAVNDK
AYEDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAELEGPILIPHAVQ
RADSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVTGNSALDLFNSVMGKTLSMFLKNI
ATYVSDCYDSIAVFLCIHIILRFKNITAKRNIPALDKCVEQEFIEEILAPPFGGMITFVK
ESEALMEKGQLDKLKNDEVRITQLVRGFSSTWKQSVEALSQDVMRSFTNFKNGTSIIQGA
LTQLIQYYHGFHKILSQPTFRSLAVRSELINLHHLMVEVKKHKPNF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatgttgttagcactgaggctcctgctgagggaaacacagctgtcagctcc
acgaccagcgccatggattacttacaggacgagaagtctgacgctgacgtcgtgccccct
ctgaacctgggcgatctggatctgtcgtcagacgagttcattctggacgaggtggacatc
cacattcaggccaatctggaggacgagttggtgcaggaagctctcagaacgggtgtggat
ctgcgtcagtactctaagcaggtggagacggagctacagcgcatcgaacaggcgtcaatc
aaagactacattaaggagagtcagaacattgcgtcactgcacaaccagatcaccgcctgt
gactccatactggaggtgagatcacgtgatcaagggctttttatcagccaatcacatcct
tccaactccatcatgaacattccgatgcctgaacgcatattcggaatacggctgcaaccc
ggatatagaccttacacggaatttgatgtgcgtgtaaacgcagtcgctgttaatgataaa
gcgtatgaagatgtagcagataaagatgatctgatgggcgtggaagatacggccaagaaa
ggttttttctccaaaccgtctctgaagagcaggaacaccatcttcactctgggtcagagg
ggggcggtgctgagcccggccgagctcgagggtcccatcctgatcccgcatgctgttcag
cgtgcagactccaggtacccgtacgagacgctgttccgcagtcagcactacgctctgctg
gataacggctgccgtgagttcctcttcctgtctgatttcttcatggtgacgggaaattca
gctctggatctgttcaacagcgtcatgggcaaaacactcagcatgttcctgaagaacatc
gctacatacgtgtcagactgctatgacagcatcgctgtgtttctgtgtatccacatcatc
ctccgcttcaaaaacatcacggccaagaggaacatccccgccctcgacaagtgtgtggag
caggagttcatcgaggagatcctggcgccgccgttcggtgggatgatcacgtttgtgaag
gagagcgaggcgctgatggagaaagggcaactggacaagctgaagaacgatgaagttcgt
atcacacagctggtgcgtggtttctccagcacgtggaagcagtcagtggaggctctgagt
caggacgtcatgcgctccttcaccaactttaaaaacggcaccagcatcatccagggggcg
ctgacgcagctcatccagtactaccacggcttccataagatcctgtcccagccgacgttc
cgcagcctggcggtgcgctccgagctcatcaacctgcaccacctcatggtggaggtgaag
aaacacaaaccgaacttttaa
DBGET
integrated database retrieval system
