Pangasianodon hypophthalmus (striped catfish): 113523980
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Entry
113523980 CDS
T05759
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04060
Cytokine-cytokine receptor interaction
phyp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113523980 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113523980 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113523980 (tnfsf13b)
04090 CD molecules [BR:
phyp04090
]
113523980 (tnfsf13b)
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
Tumor necrosis fators
113523980 (tnfsf13b)
CD molecules [BR:
phyp04090
]
Proteins
113523980 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
113523980
NCBI-ProteinID:
XP_026765891
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MRAVGAAPVQVERQRPSWVVVVVTVAAITSSSLSALSLYHVLALQAEVEVLRSEVSRRRE
GCRDTAGESVRGPQPQQQPHDDDRNKSLVSNSVAPPEMQMDASGRQQEQIRLKKRSLGSE
SEQSVFQPFLQMMADSKRELHQKEFALEKHTGIPWQEGLKRGEALEKDQDAIVVKEGGYY
FIYSQVYYKDPTFAMGHIVIRMKKHVVGDESQHVVLFRCIQSMNMKVPYNTCYTGGIVKL
DVGDRVELLIPRPTANISLDGDCTYLGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcagtgggtgctgctccagttcaggtggagcgtcagaggccttcatgggttgtt
gtggtagtgactgtggcggcgatcacctcatcctcgctatcagctctgtccctataccac
gtgctggctctgcaggcagaggtggaagtgctgaggagcgaagtgagccgcaggagagaa
ggatgcagggacacagcgggggaaagtgtgagaggacctcagcctcagcagcagccacat
gacgatgacaggaacaaatccctggtgagtaacagtgtggcgcctcctgaaatgcagatg
gacgcttctggaaggcagcaggagcagatcagattgaagaagagaagcctgggaagtgag
tctgaacaatcagtgtttcagccgttcttgcagatgatggcagacagcaagagggagctc
catcagaaagagtttgcactggagaaacacactggcattccatggcaggagggtctaaag
cgaggcgaggctcttgagaaggatcaggatgccatagtggtcaaagaggggggctactac
ttcatttacagtcaggtttattacaaagaccccacttttgcaatgggccacatcgtgatc
cgcatgaaaaagcatgtggttggggacgagagtcaacatgttgttctgttccgctgcatc
cagagcatgaacatgaaggttccctataacacctgctacacaggagggatagtgaagcta
gatgttggggacagagtggagctgctcatacctcgcccaacagcaaacatctctctggat
ggagactgcacctacctgggggccatcaaactggcctga
DBGET
integrated database retrieval system
