KEGG   Pangasianodon hypophthalmus (striped catfish): 113524149
Entry
113524149         CDS       T05759                                 
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410  Base excision repair
phyp04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113524149 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    113524149 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113524149 (parp4)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113524149 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA WGR-like_PARP4 BRCT VWA_2 BRCT_2 PTCB-BRCT
Other DBs
NCBI-GeneID: 113524149
NCBI-ProteinID: XP_026766085
LinkDB
Position
Unknown
AA seq 1824 aa
MAIFSDCSVVLDLKNVPFKERKKLMTAILDNGGDISYVVNQKCSFVVATSLENISSSRWR
SAQKHQTPVVSVQYVWSCLEKGLLLPVQEHVLEPQTPHPAELKFRGQPQSQNSGIHDEKA
EIQVKDGTYLGRFRLFKENDHDMPEFSSDFQVAKYSVLVKAQPKTWSILELQSAKGQAGQ
QYRVVSSIMHEAEKSVVWDKQVHSCSSEDAVEAYLMLIKELQVQGFTPTQTLPVWAEKLT
SHSLQQLLLEEKLNCSTISQEVAVFVELIWTEALGSLSNILTIPVTSISLNDVSRVEGLL
LQVQKSQCEDEVKGLLEEVNTLLPLRIREPDSKNKLVSQKLDLCQLIRDILNMTEVTLGN
PCPSSLGKYRALRCSIEQVPSQSPEFQSVCQLLQDRPAQIQQILRVSRGTELHMFKNELG
NIKPLLHSTASSSLVGILSRGLLLPRVGVEQHGIERTDIGNLGSGIYFSDSLNTSVKYSK
PSVTDGCRLLLVCEVALGQCKDLHKRDFKLTSAPEGYNSVHGVRRTQNTQSDFEDDEYVV
YNTDQIRLKYVVQYLLTEDEVKDFQPHVDTTLAPPHFASSSHLWSSDDGEDLGVTKNPLE
EVTAGLLDSNGQTLPLQAVHVRCKLMDLLSQVVIFQTYTNNSSVPIEAKYVFPLEETAAV
CGFEAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGNLPPGATV
LIKVTFITELVVRAGTIIFSLGSVAPWQQSSALNQRTQTTVEKVCVNELQPEGEFSLCMS
IEMPYEIINLECSHQIKIKRTDCKAVVSTLPDQTLSTDGFRLSFTLFQIHMPRMWVEKHP
EKDTEACMLVFYPHFESSGVSLSDVSDVIIVLDTSESMRGDAMLNARRIALKVLNSLDRS
LRVNIISFGSDYKEAFPSPNLLEEVFEEAKNFIKSSDAVGGSTELWRPLRTLNLLPPSRG
VRNVLLISDGHVQNQPQTLQLVRDNVRHTRFFTCGLNLTANRYMLRALAQAGGGTYEFFD
TKTKHTWAEKVNSQVRCMVSPGCSSVAVKWQQFNPTAPSPVQAPSQLHALFSDCHTLVYG
FVPHCTQATLFGDLSGQEIETMVSTTELQKTKGTFLHKLTARAIIRDYEDGSLGSNEAEH
EGKKAELKSYIIELSKEFSILSQFTSFVAIEERDQEQLDSGFTDIPKIIAEEDVDILSYM
GWTEQKQWSQELQYCLLEDVSEGSSQHSLNLCSAAEDRFNVYADKDEYSESESSLMGSCL
ESLLMAADDLPSEHETVFEASPCRASTDTDEYTHSSRPPLQRKFSSRSNIKAKALMRSRA
RVNMAPMSSEFALRKEPSGTSLICPPKNMMEEGNALSDALSSPRGHASARLSMPAANCLA
AHDVDSAFARITSATFDALNLSAVSSSSIQSTQGFSSPPSIGFKVPPPPPPFCLGASPLP
PLVYGSAPAPPPSDSMGFQAPPLPSAVFGAAPLNLNFGVSPPPSDSFTATPPPSLLFGAA
AFRPSSIGFGPPPPPPSVIFGDPPSPAGFRSSAFPPLPPLPHSICFRDIPYFSSVDFEEP
APPPPSAGFRVGALARSVVADTPSSGPFSKSGSLPVEAVAEMGISSAGLGFPKAQNQFLS
RAMKRRVQKCSFESFSAKSHSTVPLEETESYQVQTDSISERYRRPDRINWEELFNLQHQD
GYWECTGTLSRFLGLDVDFFANVFLKEKGICSLGAKAHADILKLVATLLVLQLMRVMKMA
DGELFQSLFRLSDHPEPRPACWEAVKRAVEWVCWADRQYPCVCSRLEFGWDWESCTRQLL
GLDALPPFSPLIPVLQRSTRLPVM
NT seq 5475 nt   +upstreamnt  +downstreamnt
atggctatattcagtgactgctctgtggttctggacctgaaaaatgtcccctttaaggag
aggaagaagctgatgactgctatattagacaatggaggagacatatcttatgtagtgaac
cagaaatgttcatttgtggttgcgaccagcctggagaacataagcagcagcagatggagg
agtgctcagaaacaccagacaccagtggtcagcgtgcagtatgtgtggagctgcctggag
aaaggactgctgctgcctgtccaagagcatgtcttagagccacaaactccacaccctgca
gagctgaagttcagaggtcagcctcagtcccaaaacagtggcattcatgatgagaaagcc
gagattcaggtgaaggatggcacgtacctgggccggttcagattattcaaggaaaatgat
catgatatgccagaattttcttcagatttccaagttgccaagtactccgttttggtcaag
gctcagccaaaaacatggtcaattctggagcttcagagtgccaaaggccaagcaggacag
caatatcgtgttgtgagctccatcatgcatgaggcagagaagagtgtagtgtgggataag
caggtgcacagctgtagctctgaggatgctgtggaggcgtatctgatgctgataaaggag
ctgcaggtccaaggttttactccgacacaaacacttcccgtatgggctgaaaagctgacc
tctcacagcctccagcagcttctgctggaggagaagctgaactgcagcacaatctcacag
gaagtggccgtctttgtggagctcatctggacagaagctctcggttcacttagcaatatc
ctgaccatccccgttaccagcatcagtctcaatgatgtgagcagagtggaaggattactg
ctgcaggtacagaagagtcagtgtgaggacgaagtcaagggtctgctggaggaagtcaac
acgctgctacctcttagaataagagagccagactcaaaaaacaagctggtctcccagaaa
ctagatctctgtcagctgatcagagatattctgaacatgacggaggtgactttgggaaac
ccctgtccatcctctctggggaaatatcgtgctctgaggtgcagtattgagcaggtgcca
tctcaaagcccagagttccagtctgtctgccagcttctgcaggataggccagctcagatc
cagcagatactgcgtgtgagtagagggacagagcttcatatgtttaagaatgaacttggc
aacattaagcctctcctccattccactgcttccagcagcctggtaggaatcctgtctcgg
ggtctgttactgcccagggtcggagtagagcagcatgggattgaaagaacagacattggg
aatctgggaagtggcatctacttcagtgactcattaaacacgtcagtcaagtattccaaa
cccagtgtgactgatggctgtcggctactgctggtgtgtgaggtggctctgggccagtgt
aaagacctgcacaaaagggatttcaagttgacctctgcccctgagggctacaacagcgtg
cacggagtccgccgtacacaaaatacacaatctgactttgaggatgatgaatatgtggtg
tataacacagaccagatcaggctgaaatatgtagttcagtatcttctaaccgaggatgaa
gtgaaggactttcagcctcatgttgacacgactctagcacctccacattttgcttcatct
tctcacctctggtccagtgatgacggtgaggatttgggagtgactaagaaccctctggag
gaggtcactgctggtttattggacagtaatggtcagacgctccccctgcaggctgtacat
gtgagatgtaagctaatggaccttctctctcaggttgtcattttccagacatacacaaat
aacagcagtgttcctattgaggcaaaatatgtcttccctctagaagagacagcagcagtg
tgtggttttgaagccttcattaatggaaagcatgttattggaaaggtaaaggagaaggag
caggcgcgtaaagaatacaagcaagctatagagaaaggccatggagcctacctgatggac
caggatgcacctgatgtgttcaccatcagtgtgggaaacctgccccctggagccacagtg
ctgatcaaagtgacgttcatcactgagctggttgtgagagcaggcaccatcatcttctcc
ctaggcagtgtggctccatggcagcaaagctcagcactgaaccagagaacccagaccact
gttgaaaaggtctgtgtgaacgagcttcagccagagggagaattctctctgtgcatgtct
attgagatgccttatgagatcattaacttggagtgctctcatcagatcaaaatcaagagg
acagattgtaaagccgtagtgagcacattaccagaccagacgctcagcactgacggcttc
cggctcagctttactctgtttcagatccatatgcccaggatgtgggtggagaaacatcca
gagaaggacactgaggcctgcatgttggtgttttatccacactttgagtccagtggcgtt
tctttgtcggatgtaagtgatgtgatcattgtgctggatacgtcggagtccatgcgagga
gatgcaatgctgaacgcacgcaggattgcgctgaaggtgctcaactcactggaccgttca
ctaagagtcaatatcatctcctttggctctgattacaaagaggccttcccttcaccaaat
ttgctagaggaggtatttgaagaagccaagaacttcattaagtcctcggatgctgttggc
ggcagcactgagctatggagacctctgcgcaccctgaatctgctgcctccttcacgtggt
gtgagaaacgtgttgcttatctctgatggacatgtccagaaccagcctcaaaccctgcag
ctggtgcgagacaatgtcagacacacacgcttcttcacctgcggcctcaatctaacagct
aatcgttatatgctgagagccctggctcaggcaggtggaggaacttatgagttttttgac
acaaagacaaagcacacctgggctgagaaggtgaattctcaggtaaggtgcatggtatca
ccaggctgcagttctgtggcagttaagtggcagcagttcaaccccacagctccctctcct
gttcaggctccctcacagctccacgctctcttcagtgactgtcacactctggtctacggc
tttgtcccacactgcactcaggccactctgtttggtgatctgagtgggcaggaaattgag
accatggtttctactacagaattacagaagactaaaggaacattccttcacaagctaaca
gcaagagcaatcatcagagactatgaggatggcagccttggctctaatgaggcagaacat
gaggggaagaaagcagagctaaaatcctacatcatcgagctcagtaaagagttctccatc
ctgtcccagttcaccagctttgttgccattgaagagagagaccaggaacagcttgactcc
ggttttactgacatccctaaaataattgcagaggaagatgtggatattctctcttatatg
ggctggaccgaacagaaacagtggagtcaagagttacaatattgccttctggaagacgtt
tctgaaggatcctcacagcactctttaaacctgtgttctgctgcagaagacagatttaat
gtatatgctgataaagatgaatacagtgaaagtgagtcatcattaatgggaagttgcctt
gagtcactattaatggcagctgacgatctcccttctgagcatgagacagtttttgaagct
tctccctgcagagcgtccacagatacagacgaatatacacactcatctcgtccacctctg
cagagaaaattctcctcacgatcaaacattaaagctaaagctttaatgcggtccagggcc
cgggttaacatggcacccatgtcttcagaatttgccctccgtaaggaaccttcaggaact
tctcttatttgtcctcccaaaaacatgatggaagaaggcaatgccctctctgatgctctc
tcttctcccagaggacatgcctctgctagactcagcatgcctgcagctaattgtcttgca
gctcatgatgttgattctgcttttgctcgcattacctcagctacttttgatgcccttaat
cttagtgctgtaagcagttcttccattcagtccacccagggattttcttctcctcccagt
attggttttaaagtccctcctccccctcctcctttttgtttaggagcatctcctcttcct
cctctcgtctatggcagtgcccctgctcctcctcctagtgatagtatgggtttccaagct
cctcctcttcctagtgctgtttttggagccgctcctcttaatcttaattttggagtctct
ccccctcccagtgatagtttcacagcaactcctcctcctagtcttcttttcggagctgct
gcttttcgtccatctagtattgggtttggaccccctcctccacctcctagtgttattttt
ggagaccctccctctcctgctggattcagatcttcagcttttcctccccttcctcccctt
cctcatagtatttgttttagagacattccttatttttctagtgttgatttcgaagaacct
gctcctcctcctcctagtgctggttttcgtgttggagcccttgctcgttctgttgtagct
gatactccttcttctggtcctttttccaaaagtggctccctacctgttgaggcagtagct
gaaatgggcatcagttcagcaggtttaggctttcccaaagctcagaatcaattcttaagt
agggccatgaaaagaagagtacaaaaatgcagttttgaatcattcagtgctaagagccac
agcacagttcctcttgaggaaacagagagctaccaagtgcagacagacagcataagtgaa
cgatacagacgacctgacagaatcaactgggaggagctgtttaaccttcaacaccaggat
ggctattgggaatgtactgggacgctaagtagattcctgggcctggatgtagacttcttt
gctaatgtcttcctgaaagagaaaggcatctgttctttgggtgcaaaggctcatgctgac
atcctgaagctggtagccacgctgctggtgctacagttgatgcgagtgatgaagatggca
gacggggagctgttccagtctctgttccgtctcagtgaccaccctgagcccaggccagcc
tgctgggaggcagtgaagagggcagtggagtgggtgtgctgggcagacagacagtaccca
tgtgtgtgcagcaggctggagtttggctgggactgggagtcctgcacacgccaactgctg
ggattggacgcgctaccccccttctcacctctgattcctgtgctccagagaagtacacgc
ctgccagtcatgtag

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