Pangasianodon hypophthalmus (striped catfish): 113524151
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Entry
113524151 CDS
T05759
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113524151
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113524151
Surveillance factors
Other surveillance factors
113524151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
113524151
NCBI-ProteinID:
XP_026766082
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MQDKEFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAAPVGVSRSRG
SARGGRGRGRGEGGFYQRGVDEEVGFGRSREVHRSQSWDDRGERRFEKPLRREGGRGGLE
DGGMGRKDYNRSDSDNWRILREEQDEEEGGGGGGGGDAGGSWRVAGTRRDDGGPRSAGWR
DHGDGRRRKFEFEFREGDAVRRRAGSEGGEEERDGLPEWCTDEEEGEMGTFDSSGAFMCV
KKTSRDAIPEDQELEFEALEEEDEAEREKKDGSAERAEDTEASGASDGGEIKTTTSSSSS
SSPPSASVSVSALGLEQETHLPSVAPPTKFSLQINEDAAPVGGSTQPPQSSPPAGTSSPP
VTAADVLPPAGDAEEEDGMTHMQQEAEKMVASLQDTSLEEERFTQALQESHGAAVTRTHT
HPTAHTHSHPNTHTLPHSAGALPLTHESAMKWFYKDPQGEIQGPFSPVEMCEWFQAGYFT
MTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLGNMDQEMLKKQLEQAATAALYQ
QLQMRFQHINRCGETGMMPAMNRSVPEAWDIHTSSSQTPGAEVSLWDLTMNNSPQGPTLE
QLQKLQQERREAELRVKREDEERKRREEKRRQQEEQKRREEEELYRRKREQQCRQQELLM
KLLQQSQQQQQQREVQGGAGWSSAQAGTLSLGKAQGKNLGLLEQQQQRAQQQQQRLAMGQ
WSDGSVGMWTGMEGKLSGTSGGSSMGIWDEAVKNQVNHRNMGMKNSMSNPSFSSEQYVLN
RRKRTEEEERLLKLLQGMKPQQDGFTTWCEQMLHALNTSANNSSSSVDVATIVAYLKEVE
SPYEVHDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQVTIHPRLHFY
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataaggagtttgctgccatcctgcaggacgagccgcagcagcccctggctctg
gtgcctctgaccgaggaggagcagaggaacttctccatgtcggtgaacagcgtggccgtg
ctgaggctcatgggcaaagggggcggggctgccccagtgggcgtgtcccgaagccgaggg
agcgctagaggaggacgagggaggggaagaggagaaggagggttctaccaaagaggagtg
gacgaggaggtgggattcggacgcagccgagaggtgcaccgcagccaaagctgggacgac
agaggcgagcgtcgttttgagaagccgctgaggagagagggaggacgcggagggttagag
gacggagggatgggacggaaggattacaatcgctccgacagcgataactggcgcattctc
cgcgaggagcaggacgaggaagagggaggaggaggaggaggaggaggagacgcaggcggg
agctggagagtggccgggacacgccgtgatgacggaggcccgcgctcggccggatggaga
gaccacggagacggacgccgcagaaagttcgagttcgagttccgggaaggcgacgcggtc
cgacggagggcagggagcgagggaggagaagaggagagggacgggctgccggagtggtgc
accgacgaagaggagggagagatgggcaccttcgattcgtccggagcgttcatgtgcgtc
aagaagacgtcgagagacgcgatccctgaagaccaggagctggagttcgaggctctggag
gaggaagacgaggccgagcgggagaagaaggacggctctgctgagagagcggaggacacc
gaagcgtccggagcgtctgatggtggagagataaaaactactacttcttcttcttcttcc
tcttctcctccttctgcctccgtttctgtctctgctctcggcttagaacaggaaacacac
ctaccttctgttgctccgcccacaaagttcagcctccagattaatgaagacgcagctcca
gtagggggcagcactcagccgcctcagagctctcctcccgctgggacttcgtctcctccc
gtcaccgccgctgacgtcctgccacccgcaggcgacgccgaggaggaggacggcatgacg
cacatgcagcaggaggcggagaagatggtggcgtctcttcaggacacgtctctggaggag
gaacgtttcacacaggcgctgcaggagagccacggagctgctgttactcgcacacacact
caccccaccgcacacacacactcccaccccaacacacacaccctgcctcactccgccggc
gcgctgccgctcactcacgagtcggccatgaagtggttctacaaagaccctcaaggagag
atccaaggcccgttcagcccagtggagatgtgcgagtggttccaggccggttatttcacg
atgaccctgctggtgaagagaggctgtgacgagggcttccagccgctgggggacgtcata
aagatgtggggacgcgtgcctttctctcccggaccctcacctcctcctctactgggtaac
atggaccaggagatgttgaagaagcagttggagcaggcagccaccgcagctctctaccag
cagctccaaatgagattccaacacatcaacaggtgtggtgagacaggaatgatgcctgct
atgaaccggtctgtgccagaagcctgggacattcatacctcatcctcacagacaccaggt
gctgaggtcagtctgtgggatctgaccatgaataactcacctcagggtccaactctcgag
cagctgcagaaactccagcaggagaggcgtgaagctgaactcagggtgaagagggaggat
gaggagcggaagcgtcgggaggagaagaggaggcagcaggaggagcagaagaggagagag
gaggaggaactgtacaggcgcaaacgtgagcagcagtgtcgtcagcaggagctcctcatg
aagctgctccagcagagtcagcagcagcagcagcagcgggaggtgcagggaggtgcaggc
tggagctcggcccaggcagggacgctctctctgggtaaagctcaggggaagaacctcggt
ctgctggagcagcaacagcagagagctcagcagcagcagcagaggctggcgatggggcag
tggagtgacggatcagtgggaatgtggacaggaatggaggggaagctcagcggcaccagt
ggtggcagcagtatgggcatctgggacgaggcggttaaaaaccaggtcaatcatcgtaac
atgggcatgaagaacagcatgagtaacccctcattcagtagtgagcagtacgtgctgaac
cgtcggaagcggacggaggaagaggagcggctgctgaagctgttacagggcatgaagcct
cagcaggatggattcaccacatggtgtgaacaaatgctgcacgctctcaacacctcggcc
aacaactcgtcctcctctgtggatgtggccaccatcgtggcgtatctaaaggaggtggag
tcgccgtacgaggttcacgactttatccgctcgtacctgggcgacacggtcgaagccaaa
gagttcgccaagcagttcctggagcgccgtgccaagcagaaagccaaccagcagcgacag
cagcagcaggtcactattcacccacgactccatttttattaa
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