Pangasianodon hypophthalmus (striped catfish): 113524207
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Entry
113524207 CDS
T05759
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113524207
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113524207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
Bromodomain
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
113524207
NCBI-ProteinID:
XP_026766158
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MASEPCSQIEAELYFLIVRFLQSGPCKKSAQTLQEELEEYEIIPERWSWDGKRYKRNFQD
WVALNQHIPADYLLRVCEQLCPLVDAHVPPSVPGLRSLLGSGRQSLLRTAKSSSHTVWTG
SAVAALHRGRPPEPPINFPKPPNIVSIMGGRQATGVARLGHALPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDNGRLLATLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQAHTASITSIQFSPSSFGSTRYLASTGADGMVCFWQWNS
ITMKFSDRPVKFAERSRPGVQISCCSFSTGGMFLATGGTDHVLRVYYLGGETPVKLSDLD
SHTDKVVAVQFCNNSDSLRFVSGSRDGTARIWHYQQQEWKSVMLDMSTKLPGSSAASGED
KTTKLVVTMVAWDRSDRTVVTAVSNLLLKVWSPTNGQLLHVLSGHDDEVFVLEPHPFDWR
IMLSAGHDGNIYIWDLSKGNKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLI
FGFGCSQTYEKIPDQMFFHTDFRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RFQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTADEGQEESPLDSLIRQLQHQ
QDERLNSGNQAAGGEAADGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQMATERDLLAWSR
RVVVNEIPSGVFRIMEESRLAKGEMERSLYNMERKKKPVHTTRTEPVDVSVRSLRRPQRK
PQQKRHTYHTRSARERRRARTLTNTREDSLSESDSEAEQEEDQNENSDASSEGDAQWENA
SSSSDSSSEYSDWTADAGINLQPPKRPIRRPARIAGSSSSEDEGEGRREGEERRKKKKEE
EEEKKKKPKQTKQKTVPAGELEEWLPPPWIMETIPRRSPFLPQMGDEPFWRISALMWEVR
YIEHNARTFNEPHSPIVTAAKAVTDVLLRFIGDQSCTDILELYNKVKTELSSAAEEEEDV
DIDSDTPGTSTGQKRSGQSSQKRGVVLDVRAWYGQCKELLRRMIASSDSEPFRQPVDLFT
YPDYRDIIDTPMDLGTVMENAHCNGPLTNGGRRSRRQPGQGDTSDSESSESSSSSSSSSS
SSSSSSSSSSESEVNDADVASFAEGGDHDYSKASRLSLARRSKMAAASFAANAKRKRRGQ
EEERTECLKRARREQTPVQAAQSEDEDEDEDEDEDEENEEVEEEEPEGEEEGEEEEEQEE
GEEQEEGEEEEEEEEGEEPEEEEEEEEEEEEEETSPQPQLPARGQRSSQRTVKAGRVNTR
NQGRRTVVYNDDSDDDAPAADPLNLGTSRSGRIRRMTERARVSHLMGWSH
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaaccgtgttcacagattgaagccgaactctatttcctgattgtcagattt
cttcaatcgggaccgtgcaaaaaatcggcacagactctgcaggaggagctggaagagtat
gagatcatcccggagcgctggagctgggacggaaaacggtacaagagaaacttccaggat
tgggtggcactgaatcagcacatcccagcagattacctgttgcgtgtgtgtgagcagttg
tgtccgttggtggacgcacacgtccctccgagcgtccccggactccgcagtctgctgggg
agcggccgacagtctctactgcgtactgccaagagttcttctcacacagtatggacgggt
tctgctgtagctgctctgcacagggggcggccccccgaaccgccaatcaacttccccaaa
ccgccaaatattgtgtcaatcatgggcggtcgccaggcaaccggggtggcccgcttgggt
cacgccctcccatcctgcacctaccagcacatgaagatgcacaggaggattctgggacac
ctgtcctcggtgtactgcgtggccttcgaccgaacgggccgccgtatctttacgggttcg
gacgactgcctggtgaagatctgggcgacagacaacgggcgtctcttggcgacgctgcgc
ggccacgcggccgagatctccgacatggcggtgaattacgagaacacgctcatcgcttcc
gccagctgtgacaaggtcatccgtgtgtggtgcctccgaacctgcgcgcccatcactgtc
ctacaggcgcacaccgcctccatcacctccatacagttctctccatcgtctttcggttct
acgcgctatctggcctcgacaggagccgacggcatggtctgcttctggcagtggaacagc
atcaccatgaaattctctgacaggccagtgaagttcgccgagcggtctcgtcccggggtt
caaatatcctgctgctccttcagtaccggtgggatgtttctggccactggagggacggat
catgtgctcagggtgtattacctgggtggtgagacacctgtgaagttgtcagacctggac
tcgcacacggataaggtggttgccgtgcagttctgcaacaacagcgacagtctacgcttt
gtgagcggcagtcgggacggaacggcgcggatctggcactaccagcagcaggagtggaag
agcgtcatgctagacatgagcaccaaactgccggggagctccgcagcatcaggagaggac
aagaccaccaagttggtggttaccatggtagcatgggaccgcagtgaccgaacagtcgtt
actgccgtctccaacttactcctcaaagtctggagccccacaaatggccagctgctacac
gtgctctcgggtcacgacgatgaggtctttgtcctggagccccaccccttcgactggcgc
atcatgctgtcggccggccacgacggcaacatctacatctgggacctcagcaaaggcaac
aaaattcggaacttcttcaacatgattgaaggtcagggtcacggagcggtgttcgactgc
aagttctcggctgacggtcagcactttgcctgcacagactcgcacgggcatctgctcatc
ttcggcttcggctgcagccaaacctacgagaagattccagatcagatgttcttccataca
gatttccggccgttgatccgggactccaataactacgtcctggatgagcagacgcagcag
gcgccgcacctcatgcctccgccgttccttgtggacgtggacgggaatccgcaccctccg
agattccagcgcctcgtacccggccgagagaactgcaaggaggagcagctggtgcctcag
ctaggctacatggctaacggtgacggagaggtggtggagcaggtgattggccagcagacg
gcagatgagggtcaggaagagagcccattggacagcttgatccggcaacttcagcaccag
caggatgagagactcaactcaggaaaccaggctgcaggtggtgaagcagcagacggtcct
ctgtcgccccctaacgtcggcctgcgcaggagcggtcaggtggaaggggttcgacagatg
cacaacaacgccccccgcagtcagatggccacggagagagacctgctcgcgtggagccgc
cgtgtggtcgttaacgaaatcccctcaggagtgttcaggataatggaggagagtcgactg
gctaaaggagaaatggagcgatctctctacaacatggagaggaagaaaaaacctgtccat
actactagaacggagccggttgacgtttcggtgcgctctctgcggagacctcagagaaaa
ccgcagcagaaacgacacacgtatcacacgcggtcagcgcgggaaaggaggcgcgcacgc
acgctcaccaacacgcgtgaggacagcctcagcgaatcagacagcgaggcagagcaggag
gaggatcagaacgagaacagtgacgcatcctctgaaggtgacgctcagtgggagaacgcc
agcagctcaagtgactcctccagcgagtattctgattggacggcagacgcaggtatcaac
ctccagccgcccaaacgaccaatcaggaggccggctcgtatcgccgggagcagcagctcg
gaggacgaaggcgaggggcggagagaaggggaggagcgtcgcaagaagaagaaggaggag
gaggaggagaagaaaaagaaacccaaacaaactaaacagaagacggttcctgccggtgag
cttgaagagtggcttcccccgccctggataatggagacgatacccaggcgatctccattc
ctacctcagatgggggacgagcccttttggaggatttcagcgctgatgtgggaggttcgt
tacatcgagcacaacgccagaacgtttaacgagccgcacagccccatcgtcacggcggct
aaagcagtcactgacgtcctgctgcgctttattggggatcagagctgtactgatatcctg
gagctgtacaataaggtcaagacggagctcagcagtgctgctgaagaagaggaggatgtt
gatatcgactccgacactccaggcacgtcgactggccagaagcggtccggtcagtcgtct
cagaagcggggcgtggtgctggacgtgcgagcgtggtacggtcagtgtaaagagctgctc
aggaggatgatcgccagctccgactccgaacccttccgccaacccgtggacctcttcacc
tacccggactacagagacatcatagacacgccgatggacctgggaacggtcatggagaat
gctcactgcaacgggccactgactaacggaggtcgaaggtcacgcagacaaccgggacag
ggagacacttcagactcagagagctcggaatcttcatcgtcgtcgtcgtcttcatcctct
tcctcctcgtcttcgtcgtcctcttcctctgagagcgaagtgaacgacgccgacgtggcc
agcttcgccgaaggcggagaccacgactacagcaaagcgtcgcgtctctctctggcacgc
aggagcaagatggccgccgctagctttgctgctaacgccaaacggaaaagaagagggcaa
gaagaggaaaggactgagtgcctcaaacgtgcgcgtagggaacagacgccggtccaggcg
gcccagagcgaggatgaggacgaggacgaggacgaagatgaggacgaggaaaacgaagag
gtagaagaggaggagcctgagggagaggaagaaggggaagaagaagaagaacaagaagaa
ggggaagaacaagaagaaggggaggaagaagaagaagaagaagaaggggaagagccagaa
gaagaggaagaagaagaagaggaggaggaggaagaggaaacgagtccacaacctcagctt
cctgccagaggtcaaaggtcaagtcagaggacagtgaaagcggggcgtgtaaacacccgt
aaccaagggagacggaccgtagtctataacgacgactcggatgacgatgcgcccgccgct
gacccgctcaatctgggcacgtcgcgttccggaaggatccgccgcatgaccgagcgagcc
agggtcagccatctgatgggctggtcacactga
DBGET
integrated database retrieval system
