Pangasianodon hypophthalmus (striped catfish): 113524219
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Entry
113524219 CDS
T05759
Name
(RefSeq) cyclic nucleotide-gated cation channel
KO
K04949
cyclic nucleotide gated channel alpha 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524219
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113524219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
113524219
NCBI-ProteinID:
XP_026766178
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MTGQAAVERSVSSHRLSVRSKLEDEPERAESAISRTDGDDDTCSELQRVAALDLPSAEML
EAFRRRRPLSRLVNLVVSLREWAHKSLVEEEQRPDSFLERFRGPQAANDQSAAPAEAPKK
TFKERWEGFVVSQSDDVYYYWLFFIALASLYNWIMLVARACFDELQIENFFLWVGLDYVC
DFIYILDTCMRLRTGYLEQGLLVKDLAKLRDSYIHTLQFKLDILSILPTELLFFITGYIP
QLRFNRLLRFSRMFEFFDRTETRTNYPNAFRICNLVLYILVIIHWNACIYYAISKALGLS
SDTWVYSGVNKTLAFCYVYCFYWSTLTLTTIGEMPPPVKDEEYVFVVFDFLVGVLIFATI
VGNVGSMIANMNATRAEFQARIDAIKHYMHFRKVNRTLETRVIKWFDYLWTNKKAVDEQE
VLKNLPDKLRAEIAINVHLDTLKKVRLFQDCEAGLLVELVLKLRPQVYSPGDYICRKGDI
GKEMYIIKEGQLAVVADDGVTQFALLTAGGCFGEISILNIQGSKMGNRRTANIRSIGYSD
LFCLSKDDLMEAVTEYPDAQKVLEERGREILRKQGLLDESVAAGGLGVIDTEERVERLDA
SLDILQTRFARLLGEFTSTQRRLKQRITALERQLCHTGLGLLSDNEAEGEHVGVPPHTHT
QADIHTQPETHTQTSAEPNSEEEK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcaggctgcagtagagcgctctgtgtcctctcaccgtctctctgtgaggagc
aaactggaggatgaacctgaacgagctgaaagtgccatcagcaggactgatggagatgat
gacacatgttcagagctgcagcgtgtcgctgctctcgatctcccaagtgcagaaatgctc
gaggccttcagacggaggagaccgctgtccaggttggtgaatctggtggtgtctctgaga
gaatgggctcataagagtctggtcgaggaggaacagcggcctgactcttttcttgagcga
ttccgtgggccccaggctgcaaacgaccaatcggctgcccccgcagaagcccccaagaaa
accttcaaggagaggtgggagggcttcgtcgtgtcccagtctgatgatgtttattattat
tggctgttcttcatcgccttggcttcactctataattggatcatgctggttgccagagca
tgttttgatgaactacaaattgagaacttcttcctgtgggtggggcttgattacgtctgc
gacttcatttacatactggacacctgcatgcgattgaggacaggataccttgagcaaggt
ctgctggtgaaagacttggccaagttgagagacagctacattcacactctgcagtttaaa
ctggacattctgtccatcctgcccacagagctgctcttcttcatcacggggtacataccc
caacttcgcttcaaccgcctgctccgcttctcgcgcatgtttgagttcttcgaccgcacc
gagacgcgcaccaactaccccaacgccttccgcatttgcaacctcgtcctctacatcctg
gtcatcatccactggaacgcgtgcatctattacgccatttccaaggccctggggctcagc
tcggatacgtgggtgtattccggcgtgaacaaaacactagcattctgctatgtgtactgc
ttctactggtccacgctaacactaaccaccattggcgaaatgccccctccagtgaaggat
gaggagtatgtctttgtagtttttgacttcctggtaggcgtgctgatcttcgccaccatt
gtcggtaacgtgggttccatgatcgccaacatgaatgctacgagggctgagttccaggca
cgcatcgatgccatcaagcactacatgcacttccgcaaggtcaaccgcaccctcgagacg
cgcgtcatcaagtggttcgactacctctggaccaacaagaaagccgtggacgaacaggag
gtgctgaagaaccttccggataagctgagggccgaaatcgctatcaatgtccacctggac
acactgaagaaagtccgtctttttcaggactgtgaagctggactactggtggagctggtt
ctgaaactgcgtcctcaagtgtacagtcctggggactacatctgcaggaagggtgatatt
gggaaggagatgtacatcatcaaggaggggcagctagctgtggtggcagatgatggtgtc
acacaatttgccttgctaaccgccggcggttgttttggcgaaattagcatcctaaacatt
caaggtagcaagatgggcaaccggcgcacggctaacatacgtagcatcggctactctgac
ctcttctgcctctcaaaggacgacctaatggaggctgtgacagaatatccagacgctcag
aaggttctggaagagcgtggaagggaaatccttagaaagcagggcctcctggatgagagc
gtagcagctggagggctaggcgtcatagacacagaggagagagtggagcgcttggatgca
tctctggatatcctgcagacacgcttcgctcgcttattaggagaattcacgagcacgcag
cgtcgtctcaaacaacgcatcacagcgctcgagaggcagctgtgtcacactggactcggg
ctgctctcggacaatgaagcggaaggagaacacgtcggtgttcctccacatacacataca
caggcagacatacacacacaacctgaaacacacacacagacttcagctgaaccgaactct
gaagaggaaaagtaa
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