Pangasianodon hypophthalmus (striped catfish): 113524355
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Entry
113524355 CDS
T05759
Name
(RefSeq) TBC1 domain family member 8-like
KO
K19951
TBC1 domain family member 8/9
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113524355
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113524355
Endosome - Golgi transport
Rab GTPases and associated proteins
113524355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_6
EF-hand_7
EF-hand_1
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
113524355
NCBI-ProteinID:
XP_026766369
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MWLNPAEVSLKNALNLWITDKSNDYFLLQRRRGHGDTGGKFTGMLVGALDTVLDSNARVA
PFRILLQVPGSQSSWVIASGATAEEIQKHWKWLDQNLLPYMSVFENKQDAASFAQGKVKG
LIAEEVLVGQAALDDDPTRFREAMVRFEQRFGLPLKEKLVAHYSCCCWKGRVPRQGWIYL
STNHLAFYSFLLGKEVKLLIPWADVTALERATFGLINDAIRVRTRQKQREFSMFLDVDEV
MTVMTQLGDMALRRLFDNGKMEPDSNITKRALEQQALCQYVLSLFGLPRSETLKEVMRCA
AWTPHARCHTPGNLYVTENYMAFSSLQEGNCTLLIPLAEVQSVEKAESTGALPNPVIISV
RSKRAFQLIEVARRDQLVESLNARLRALRWHSNGKKPLISSTPYYTFCYDTDDTLHPVIL
EEALITTFHTSQSESSELRSLWDEHFEEFGRGVHMFRTEKTRKLVAAGIPESLRGEMWLT
FSDARSFLNTHSRAYSDLLAERTNEQTSDEIERDLRRSLPEHAAFQSETGIAALRRVLNA
YAFRNPGIGYCQSMNILASVLLLYTREEEAFWLLVTVCERMLPDYFNRRVIGAQVDRSVF
EELIRERLPHLAERVPDLSALSSLSLSWFLALFLSAVPFRSGLRILDCFFCHGVKIIFQL
GLAVLDANVDEICASTDDGQSLMILTSFLERVRDDEGSCVSSEETGPAGHIQISTLISDA
YEKFGDLTVKQLERMRSRHRIQVLQAHEDTSKENTLRLVSPGVSLSQENLSELYDLFKTE
HFINLYWGDGVCSASLEQYQLDRAQFKSLYQLLMPWQCGSHTDTMAQRTFNLLDQDGQNH
ITFSQFARWIGVCVCV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaatccggccgaggtttcgctgaaaaatgcgctgaatctctggatcacggac
aaatctaatgattatttcctgctgcagcgaagaaggggacatggagacaccgggggcaaa
ttcacaggtatgttggtgggagcactggacactgtgttggactcaaacgcacgagtcgct
ccatttcggatccttctacaagttccgggttcgcagagcagctgggtcatcgctagcgga
gccacagctgaagaaattcagaaacactggaaatggctggaccagaacttgttgccgtac
atgtcggtatttgagaacaagcaggacgctgcaagctttgcacagggcaaagtcaagggc
ctgattgctgaggaagtactggttggccaggcagcgctggatgatgacccaacccgtttc
cgcgaggccatggtgcgatttgagcagcgatttggcctcccgctgaaagaaaaattggtg
gctcattactcctgctgctgctggaaaggtcgagtgccacgtcagggctggatctacctc
tccaccaatcacctggctttctactcgttcctgctcggaaaagaggtgaagctgttgatc
ccgtgggcagacgtcacggctctggagcgcgccacttttggtctcatcaacgatgcgatc
agagttcggacgcgccaaaagcagcgtgaattctccatgttccttgatgtcgatgaagtg
atgaccgtgatgactcagctgggcgatatggcgctgcgaagactgtttgataacggcaaa
atggaaccggattccaacattactaaacgggcactggagcagcaggccctgtgccagtac
gtgctgtcactcttcggcctcccgcgttctgagacgctaaaggaagtgatgcgatgcgca
gcttggacgcctcacgcccgatgtcacacccctgggaatctctatgttacggaaaattac
atggccttcagcagccttcaggagggaaactgcaccctcctcatcccgctcgccgaggtg
cagtctgtggagaaagcagagagcactggcgcgctgccgaaccctgtgatcatcagcgtg
cgctcgaagcgggctttccagctgatcgaagtggcgcgacgagaccagctggtggaaagt
ctgaatgcccgtctccgagcgctgcgctggcacagcaacggcaaaaagcctctgatttcc
tccactccatattatacattttgctacgacacggacgacactctccatcccgttattctc
gaggaagcgttaatcaccacattccataccagccaatcagaatcctccgagctcaggagc
ctgtgggatgagcactttgaggagttcggccgcggcgtgcacatgttccgcactgagaaa
acgcgaaaactggtggctgcgggcatcccggagtcgctgcgtggagagatgtggctcacc
ttttcagatgcacggtcctttctgaacacccactcacgcgcttactctgatttgctggcg
gagaggacaaacgagcagacgagtgacgagatcgagagagacttgcggcgctcattgcct
gaacacgccgcgtttcagagcgagacgggcatcgcggcgctgcgccgcgtactcaatgcc
tacgccttccgcaacccgggcatcggctactgccagtctatgaacatcttagcatcagtg
ttgctgctctacacgagagaggaagaagcgttctggctgctggtcacagtgtgtgagaga
atgctgcccgattacttcaaccgcagagtcattggtgctcaggtggaccgctcagtgttt
gaggagctgatccgtgagcgattgccgcacctggccgagcgcgtcccggacctctccgct
ctctcatcgctctcgctctcctggttcctcgctctgttcctcagcgctgttccattccgt
agcggcctgcgcatccttgactgcttcttctgccacggcgtcaaaatcattttccagctg
ggccttgctgtgcttgatgctaacgttgatgaaatttgtgctagcaccgacgatggtcag
tctctgatgatactgaccagtttcctggagcgtgtccgagacgatgaggggtcgtgtgtg
agttctgaagagacggggcctgcaggacacatacaaatcagtactctcatcagtgatgca
tatgagaaatttggggacctgacagtaaagcagctggaaaggatgagatcgagacacaga
atccaagtgctgcaggcccacgaggacacctctaaagagaacacactgcgtcttgtctcg
cctggtgtctcgctctctcaggagaatctatcagaactctacgacctctttaagacggaa
catttcattaacctgtactggggagacggagtgtgttctgcctctcttgaacagtaccaa
ctggaccgagcccagtttaagagcctctaccagctgctgatgccttggcagtgtggatca
cacacagatacaatggcacagagaaccttcaacctgctggaccaagatggacaaaaccac
atcacattcagccagtttgcccgctggataggtgtgtgtgtgtgtgtgtga
DBGET
integrated database retrieval system
