Pangasianodon hypophthalmus (striped catfish): 113524371
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Entry
113524371 CDS
T05759
Name
(RefSeq) transcription factor CP2-like protein 1 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113524371
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
113524371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CP2
SAM_3
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
113524371
NCBI-ProteinID:
XP_026766386
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MYQQKAQSGCVRETVATLLKAKPERQPAGSEAKLAPFQYILCAATSPAVKLQEETLTYLN
QGQSYEIRMLNLKLLECTHVSSKWVKSTVRVVFHDRRLQYSEYQQLEGWSWNRPGDRILD
LDTTLSVGIIEPQANPLQLNSIEFLWDPVKNASIFIQVNCISTEFTPRKHGGEKGVPFRI
QVDTFIQNEHGEYLEHVHSCSCQIKVFKPKGANRRLKTDREKIEKKSLQDREKYQPSFET
TILTECSPWPDGASISSVSSSLSPMCHISTAHDFTDGDDRDCSPNQRRELLLPSCSAQLV
PSLSPQEAQEWLHRNRFSSFCRLFSNFSGADLVKMSRNDFVQICGPADGIRLFNAIKGRC
IQPRLTVYVSLQKNKNQPNSKPCSDDVYHALSLEHLTLFELTEKIASLYSVPVQQICHVY
RQGPMGIYVLVSDEMVKNFTEETRFIISALKVDDCICFSVMMDESNEGYHVVLK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagcagaaagcgcagtcggggtgtgtgagagaaacagtagctacactgctgaag
gccaagccagagcgacagccagctggatcagaggccaaactggccccctttcaatatatc
ttgtgtgcagccacttctccagctgtcaaattgcaagaggaaactctcacgtacctcaac
cagggtcagtcctacgaaatccgtatgcttaacctaaaactgttggagtgtacacatgta
agcagcaaatgggtaaagagcactgtccgtgtagtgtttcatgatcggcgcctgcaatac
agcgagtaccagcagctggagggatggagctggaaccggccaggagacagaattctggat
cttgatactaccctctctgtggggataatagagcctcaagctaatccactgcagctcaac
tctattgagttcctctgggatcctgtaaaaaatgcttcaatatttattcaagtaaactgt
attagcactgagtttacacccaggaaacatggcggagagaagggagttcccttccggatt
caggtagatactttcatacagaatgaacatggagaatacctggagcatgtgcactcttgc
agctgccaaatcaaagtcttcaagccaaaaggagcaaatcgcaggctgaagacagacaga
gagaaaattgagaaaaagagtcttcaagacagagaaaaatatcaaccatcctttgaaact
actatacttactgagtgttctccctggcctgatggtgcatccatcagcagtgttagcagc
agtctgtctcccatgtgccacatctcaactgctcacgacttcacagatggagatgataga
gactgctctccgaaccagcggagggagctactcctgcccagctgctctgctcagcttgtg
ccatcactctcccctcaggaagcacaggagtggctccaccggaacaggttctcatctttc
tgtagacttttctccaacttctcaggtgctgatttggttaagatgagcagaaatgacttt
gttcagatctgcggtcctgctgatgggatccgcctgtttaacgccattaaaggaaggtgt
attcagccacgactcacagtgtatgtttccctacagaagaacaaaaatcagccaaacagc
aagccatgcagtgatgatgtgtaccatgccttgtccttggagcacttaactctttttgag
ctcacagagaagatagcaagtctatacagtgttccagtgcagcaaatctgccatgtttac
agacaagggccaatggggatatacgtcctggtttcagatgagatggtaaagaatttcaca
gaggaaacaagattcataataagtgctctaaaagtagatgactgtatctgtttctcagtg
atgatggatgaaagtaacgaggggtaccatgttgtactgaagtga
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