Pangasianodon hypophthalmus (striped catfish): 113524388
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Entry
113524388 CDS
T05759
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113524388
03041 Spliceosome [BR:
phyp03041
]
113524388
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113524388
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113524388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113524388
NCBI-ProteinID:
XP_026766393
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MDGRLETDLYPLGSSYVTDIDGVHDITVGTKRGSDELFSSCVSNGPYIMSSGAANGNDSK
KFKGDVRSPGVPSRVVHVRKLPSDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEE
SAQTMVNYYSSVTPVIRNHPVFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTASVPLS
GVEAGGSGSQSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALVQYSD
SMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDGPASLE
PQTIATTAFTPGLISAAPFASAHGFPPAFALQQTAGLSLPGIPSALASLGVPAAAAGRLG
LSGLNAATHAVLLVSNLNPESVTPQCLFILFGMLSLPSPPFCVSYL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggacggacgtttggagacggatttgtatcctctgggatccagctacgtcactgacatt
gacggtgtccatgatataacagtcggcacaaagagaggatctgacgaactcttttcctcc
tgcgtctctaacggtccgtatatcatgagctcaggcgcagcgaacgggaacgacagtaaa
aagtttaaaggcgacgtgaggagtccaggcgtcccgtcccgcgtcgtccacgtcagaaag
ctgcccagcgacatcaacgaagccgaggtgatctcgttaggacttcccttcggcaaagtg
accaacctgctgatgctcaagggcaaaaaccaggcttttctggagatgaacacggaggag
tcggctcagaccatggtgaactactactcctccgtcacgcccgtcatccgaaaccatccc
gtcttcatgcagtactccaaccacaaggagctgaagaccgacaactcgcccaaccaagtg
cgcgctcaggcggccctgcaggcggtgaacgcggttcagacggccagcgtgcctctcagc
ggcgtggaagcaggaggatcaggaagtcagagtcctgtgctgcgggtgattgtggagaac
ctgttctaccccgtcactctggaggttctgcaccagatcttctcgaagttcggcacggtg
ctgaagatcatcacgtttaccaaaaacaatcagttccaggctctggttcagtactcggac
tccatgacggctcagcacgccaagctgtctctggatggacagaacatctataacgcctgc
tgtacgctgcgcatcagcttctccaaactcaccagcctgaacgtcaagtacaacaacgac
aagagcagagactacacccggcccgatctgcccacgggggacggcccggcctcgctcgaa
ccgcagaccatcgccaccaccgccttcactcctggtttaatctctgcagctccttttgcg
agtgctcacggtttccctccggcgttcgccctccagcagactgcaggtttgtctcttccc
ggcattcccagtgcgttggcgtctctcggcgttccggcggccgccgcgggtcgtctcggg
ttgtccggactcaacgccgcgacacacgccgtcctgctcgtcagtaacctcaaccccgag
agcgttacgccccaatgcctctttattcttttcggtatgttatcactgccatctcctcct
ttttgtgtttcatatttataa
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