Pangasianodon hypophthalmus (striped catfish): 113524389
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Entry
113524389 CDS
T05759
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113524389
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524389
04082 Neuroactive ligand signaling
113524389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524389
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113524389
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113524389
NCBI-ProteinID:
XP_026766395
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSVMLCRLVAYLSVSLHALISPCQLHPQPCGILAQIGHTIRLGAVLPSHQPSRVRAALNR
ALLHARNRPHAPLLPYNLSLEVVWARAAHADPESVFRCVCQDVVVRGVSAVLAFPQSHHE
LVQVDFISAFLEIPFISIIEEGEALQTQNRFHLQMLTHVPASGLAELLLSVLVRAGWRGG
AAVMCPGGGDAGVLEHLHQRGRAGLNGSHWHLWETLDLSSHWASSSSEEEANNNNNNKFM
LHKKPEDASQEVADKEQEVSELLSQLMTRTPSAVHSSAVVFGSDPECVSLVLRGATRLGH
TLWVLGLPLNPDALSAVGSPKGLLAYGQPERRPLSSYIGDALQLVGRAVSDASVVRPDLA
LIQNMVNCFDKPNKHEVLSSGHYLSRFFSNTSFEGLTGRVSVHPSISRVSTTHGFHIWSL
QRDALGQPSWATVAEWQSGHLEMDKKSIWPELMKDEMDQDVTIQPGGRWQPGLPVSGHRL
RVVTLVEHPFVFTRNADEDGRCPAGQLCLDPRTNSSDILNHLFRDLEQRNSSSLPSEMIK
CCYGYCIDLLEKLAEDMRFDFELYIVGDGKYGAWKNGQWTGLVGDLLSGAADVAITSFSI
NSARSKVMDFTSPFFSTSLAILVRSKDTAAPIGAFMWPLHWSMWVAIFITLHITALFLTL
YEWKSPFGMTPHGRNRVRVFSYSSALNLCYAVLFGRTVASKTPKCWTGRFLMNLWAIFCL
LVLSSYTANLAAVMVGEKIFEEVSGIHDAKLQHPSLGFRFGTVHESSAEDYMKKSFPEVH
EYMRHFNQPTTPQGVATLKSSSARRFHHG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatgctctgcaggctcgtggcgtatctctccgtgtctctgcacgcgctcatc
tccccgtgccagctccatcctcagccctgtggcatcctcgcgcagatcggacacaccatc
cgcctcggcgccgtcctgccctcccatcagccctcgcgcgtccgagccgccctgaaccgc
gcgctccttcacgccaggaaccggccccacgcgccgctcttaccctacaacctcagcctg
gaggtggtgtgggcgcgagcggcgcacgcggacccggagtcggtgttcaggtgcgtgtgt
caggacgtggtggtgcgcggggtctcggccgtgctcgccttcccgcagagccaccacgag
ctcgtgcaggtggacttcatttccgcttttctggagatccccttcatcagcatcatcgag
gaaggagaagcgcttcagacgcagaaccggttccacctgcagatgctgactcatgtccct
gcatctggattggctgagctgcttctgtcggttctggtgcgagcggggtggcggggcggg
gcggcggtgatgtgccccggagggggcgacgccggggtgttagaacacctccaccagcgg
gggcgggccgggctaaacggctcacactggcatctgtgggaaacccttgacctttccagt
cactgggcatcttcatcgagtgaggaggaagctaataacaacaacaacaacaaatttatg
ttacataaaaagcccgaggatgcgtcacaggaagtagctgataaggaacaggaagtgagc
gagctcctctcacagctcatgacccgaaccccatccgccgtgcattccagcgcggtcgtg
ttcgggtcggacccggagtgtgtgagcttggttttgcgcggagcgacgcgactcggacac
acgctctgggttctaggactgcccctgaacccggacgctttaagtgctgtcgggtctccg
aaaggcctgctagcgtacggacagccggagcgcagaccgctcagctcctacatcggcgac
gcgctgcagctggtgggccgggccgtgtccgacgccagcgtggtgcgacccgacctggcg
ctcatccagaacatggtcaactgcttcgacaagcccaataaacacgaggtgctgtcatcc
ggacactacctgtccagattcttctccaacacgtccttcgagggtctgacgggtcgtgtc
agcgtgcatccctccatctctagagtttccaccacacatgggttccacatttggagcctt
cagagggacgctctaggtcagccgagctgggccacggtggctgagtggcagtctggacac
ttggagatggataagaagagcatttggccggaattaatgaaagatgagatggatcaggat
gtgaccatccagccgggaggacgttggcaacccggacttcctgtttctgggcacagactc
cgcgttgtgactttggtggagcatccgtttgtttttacccgcaatgctgatgaagatggc
cgatgcccggctggacagctttgtctggaccctcgaaccaacagctcagacattctgaac
catcttttcagagatctggagcagagaaacagcagctcgttaccgtctgagatgatcaaa
tgctgctatggatactgcatcgacctgctggagaagctcgccgaggatatgcggtttgat
ttcgagctctacatcgtaggggatggaaagtacggagcgtggaagaatgggcagtggacc
ggactggtgggagacttgctgagcggcgcggccgacgtggccatcaccagcttcagcatc
aattcagcgcggagtaaagtgatggacttcaccagcccgttcttctccaccagcttggcc
atcctggtgcgcagtaaggacacggccgcgcccatcggagccttcatgtggccgttacac
tggtccatgtgggtggcgatcttcatcacgctccacatcaccgcacttttcctcacactc
tacgagtggaagagtccgttcggaatgacgccgcacggacgaaaccgggtccgagtcttt
tcctattcttctgcactcaacctctgctacgccgtgctgttcggaagaaccgtcgcaagc
aagacgccaaaatgctggactggacgattcctcatgaacctctgggccatcttctgcctg
ctggtgctctccagctacacggctaacttagcggccgtaatggtgggcgagaaaatattc
gaggaggtttcgggaattcacgatgccaagctccagcatccgtctctggggttccggttt
ggtacggtccacgagagcagcgctgaagattacatgaagaagagttttcctgaagttcac
gagtacatgagacacttcaaccagcccaccacaccacagggggtcgctacgctcaaatcc
tcctcagctcgacgctttcatcatggataa
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