Pangasianodon hypophthalmus (striped catfish): 113524437
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Entry
113524437 CDS
T05759
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113524437
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113524437
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113524437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113524437
NCBI-ProteinID:
XP_026766467
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MQKRRRTSSSCIALFLCSVLLSLALPRCVSCAGTDKTDKTVVNKEEYYTATINATVQDSR
GNTKRVISKEDGRYGQNSPKSEVKGIIITPAAVNGGTGDTVAVMITESLGKDLLSFLEKN
ETVWVSVSVGSRGPVKNLNRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTNARDRSQR
RLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCVD
PWLNEHCTCPMCKLNILKALGIMTNLQCVDNVAFDMERMTRTHSSSQRVALMDVTSETSV
SVEPLTRSGSSQLLSESELTHTHSHTHRTGEINIAVTKEWFIVGSFAVLSVLTLCYMIIR
ATGNNYDNTALDMA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagacggagaacgtcttcatcctgcatcgctttgttcctctgctccgtcctt
ctctcactcgccctgcccaggtgtgtgtcctgcgcaggtacggacaaaacggacaaaacg
gtggtgaacaaagaggaatattacaccgctacaattaacgccaccgtgcaggacagcagg
ggaaacaccaagcgcgtgatatcgaaggaggacggcaggtacggacagaactcgcccaaa
tcggaggtgaaggggataataattacacctgctgctgtcaacggaggcaccggggacacg
gtggcggtgatgattaccgagtcgctggggaaggacctgctgtctttcttggagaagaac
gagacggtttgggtttcggtgtcggtcggttctcgaggtccggtgaagaacctgaaccgc
ggctcgctggtgttcgtctccatctccttcatcgtcctgatgatcatctcctccgcctgg
ctcatcttctacttcatccagaagatcagagacactaacgcacgggatcggagtcagcga
cggctcggagacgctgcgaagaaagcgatcagtaagctgacgactcggacggtgaagcga
ggcgacaaggaaacagaacctgattttaatcactgtgctgtgtgcatcgaaggctaccag
ctgaacgacgtggtccgcatcctaccctgcaaacacgttttccataagatgtgtgtggat
ccgtggctgaacgaacactgcacctgtcccatgtgtaaactcaacatcctcaaagctctg
ggcatcatgaccaacctgcagtgtgtagataacgtggcgttcgatatggagcggatgacg
cgcactcactcctccagccagcgggtggcgctgatggacgtgacgtctgagacgagcgtc
agtgtggagccgctcacacgctccggctcgtctcagctgctgtccgagtccgagctcaca
cacacacactctcacacacaccgcaccggggagatcaacatcgccgtcaccaaagagtgg
tttattgtgggcagcttcgccgtcctcagtgttttaacgctgtgctacatgatcatcaga
gccaccggcaacaactacgacaacacagcattggacatggcctga
DBGET
integrated database retrieval system
