Pangasianodon hypophthalmus (striped catfish): 113524490
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Entry
113524490 CDS
T05759
Symbol
ufd1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113524490 (ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113524490 (ufd1)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113524490 (ufd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
113524490
NCBI-ProteinID:
XP_026766566
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MFSFNMFDHPIPRAFHNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPTQHHEEPADEETDPSNYEMDIGFRAFTGSGNRLDGKK
KGIEPSPSPIVPGDIKRGIPNYDFKVGKITFIRNSRPQPRKTEEDDSSSSFIAFSGEGQS
LRKKGRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttttaacatgtttgatcacccgatcccgcgggccttccacaaccgcttctcc
actcagtaccgctgttactctgtgtcaatgctggccggacccaacgaccgatcagacgtc
gagaaaggcggaaaaattatcatgcccccatctgcactggaccagctaagcagacttaat
atcacataccctatgttgttcaaactgaccaataagaactcggacagaatgacacactgt
ggtgttttggagtttgttgctgatgaagggatctgttacctgcctcactggatgatgcag
aacctcttattggaagaaggaggtctggtccaggttgaaagtgtcaatctcatggtggca
acatactctaaatttcagcctcagagtccagacttcttggacatcacaaaccccaaagct
gtactagaaaatgctttgagaaactttgcctgcttgactaccggtgatgtcattgccatc
aactataatgaaaagatctatgagctgcgtgtcatggagaccaaaccggacaaagcagtg
tccattattgaatgtgatatgaacgttgactttgatgctccacttggttataaagagccg
gagagacccacacagcatcacgaggaaccagcagatgaagagacagaccccagtaattat
gagatggatattggattcagagctttcacaggctctgggaatcgccttgatggaaagaag
aaaggcattgagccaagtccttctcccatcgttccaggtgacatcaagcggggtattccg
aactatgacttcaaggttgggaagatcactttcatcagaaactccagaccacagcctcgg
aaaacagaggaggatgactcttccagtagcttcattgcattctcaggagaaggccagtcc
ttgcgcaagaagggcaggaaaccatga
DBGET
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