Pangasianodon hypophthalmus (striped catfish): 113524513
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Entry
113524513 CDS
T05759
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp02010
ABC transporters
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113524513
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113524513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113524513
Transporters [BR:
phyp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113524513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
113524513
NCBI-ProteinID:
XP_026766599
LinkDB
All DBs
Position
Unknown
AA seq
2269 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFTDAKKILIYSQNDK
SFEGYKGLVRALRKLQSNTAGFKLKDFLRDNETLSEFLEQNATLSKHAVQQIVEADVNLE
KVLIKGFGVHLRDLCNTTSLEEFVSIADHNVSEMTQKIICQSPADWLNSAESHFLSNLDF
LKPIRKDVRSNPKVVQDVSLATDMLLESLGSLAVELVSMKSWRDMRNEILFLTGNATHSP
NHVYQAVSRIVCGHPEGGGLKIKSLNWYEDHNYKALFGNHNDSDSEPVSVYDNTSTPYCN
SMMRTLESSPISRMIWRALKPLLMGKILYTPDTPATRRIIHEVNKTFQELGVLRDLGGMW
EEMRVKVWDFMENSEEVDLVRTLLQNNASAQFFNARLKETDWRVEDISRFLSKASEDTRP
SGTGYTWRDVFNETDQAILTISRFMECVNLDKLEPVSTEERLVNKSMRLLDNRKFWAGIV
FPDMQADSSELPPNVSYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
GIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGV
VYLFLVSFAIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGVGIQWDNLLSSPMQEDNYSLTTSILLMLIDAVLYAI
MTWYIEAVFPGQYGIPRPWYFPLTKSYWCGEKCGWTTASSTNKKENAEAVCIEEVPADLE
PGVYIENLVKVYRHGNKLAVDDLTLGFYEDQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKSEMDQIV
TDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFDP
SLSSCRNSSSTVSYSKNSLKKDDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPS
ARLVEDLGHEITYVLPYEAAKDGAFVELFHEIDDRLIDLGISSYGISDTTLEEIFLKVAD
DNGVDAVTSDGTILPRRHRRHAFGDHQSCLKPFTEDDSFDFNDSEGDPESRETDWLGVSD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLELEPSMYEEQYSFISNDAPEEMHTNKLLGALTDSPAYSGRCSEDGMPGDGSCSIR
ESEWTVPEIPKTVSDIFQTGNWTMENPSPLCECSCEEKKKMLPECPPGAGGLPPPQIKVS
STETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQGLPPADEIS
KAIALMHARFNLERGTAADRFLRGLSSFIGGLDTKNNVKIWFNNKGWHSIAAFLNVMNNG
ILRASLPTGLNPAKFAIRAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
GNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAVEGVVFFCITVLIQYRFCIKARGISAHLKPINEEDEDVARERQRILGGGGQSDIL
ELRQLTKVYKRKQKPAVDRLCVGIPRGECFGLLGVNGAGKTSTFKMLTGDSVITSGEAYL
AGKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSEPRL
EPVMELIERELPGSILKEKHRNMLQYQLPSSLSSLARIFSILSKNKEQLHIEDYSVSQTT
LDQVFVNFAKDQSDEDHVKDISINKSDAVVDFSNLDAFLMDAKAQETVV
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagctgggcttgctgctgtggaagaacttcacctaccgacggaga
cagaccatccagctgctgattgagatcgtctggcctctcttcatctttttcattttgata
tccgtgcgactccactatcctccgtatgaacagcatgaatgccactttcccaacaaggcc
atgccatcagcgggcacgttgccctgggtacagggaatcatctgcaatgccaacaacccc
tgcttccggtaccccactccgggagagactcctggtgtggtgggcaactttaacgactcc
ataatctcccggctgttcaccgacgccaagaaaatcctcatctacagccaaaacgataag
agttttgagggatacaagggactcgtccgagctctcaggaaactacagagcaacactgca
ggttttaagttgaaggacttcctccgtgataatgaaaccctgtctgagttcctggagcag
aacgcaacgctgagcaaacacgctgtgcagcagatcgtggaggccgacgtcaacctggaa
aaagtgctgattaaaggcttcggagtgcacctgagagatctgtgcaacacgacgtcgctg
gaggagtttgtgagcattgccgatcacaacgtctccgagatgacgcagaaaatcatctgt
cagtcacctgctgattggctgaacagcgcagagagccacttcctgtccaaccttgacttc
ctgaaacccatacggaaggacgtcagatccaaccctaaagtcgtccaggacgtgtccctg
gccactgatatgcttctggagagtctgggatcgttggctgttgagctggtgagcatgaag
agttggcgtgacatgcggaatgagatcctgttcctgaccgggaatgccacacactcgccc
aatcatgtgtaccaagccgtgtcacgcattgtgtgtggacatccggagggcggcggcctg
aagatcaaatctctcaactggtacgaagatcacaactacaaggccctgttcggtaaccat
aacgacagcgacagcgagcccgtatccgtctacgacaacacatccactccatactgtaac
agcatgatgaggactttggagtcgagtccgatctcgcggatgatctggagagcgctgaag
cctctgctcatggggaagatcttatacacacctgatacaccggccacacgcaggattata
cacgaggtgaataagacgttccaggagctaggcgtgctgcgggatttaggaggaatgtgg
gaggagatgagggtgaaagtctgggacttcatggagaacagtgaggaagtggatcttgtc
agaactctgctccagaataacgccagcgctcagttcttcaacgccaggctgaaagaaacg
gactggcgagtggaggacatttcacggttcttgtctaaagcctctgaggacacgcgcccc
tcaggtacagggtacacctggagagacgtgtttaacgagacggaccaggccattctgacc
atctcacgtttcatggagtgtgtgaacttggacaagttggagccggtgtcaactgaggag
cgtctggtgaataaatccatgcgactactggacaatcgcaagttctgggccgggatcgtg
tttccggacatgcaggccgactcctccgagcttcctcccaacgtcagctacaagattcgc
atggacatcgacaatgtggagcgtaccaataagatcaaggatggatattgggaccctggc
cctcgtgctgacccgtttgaggatctgcgctacatctgggggggattttcatacctacag
gatgttattgaacacgggataatccgggctctgacaggcagcaaggaaaaaactggagtt
tacatccagcagatgccgtacccatgttacgtggacgatattttcttgcgagtgatgagt
cgctcgatgccgctcttcatgacactggcctggatgtactcagtggcgatcattattaaa
ggcatagtgtacgagaaagaggcgcgtctgaaggagaccatgaggattatgggattggat
aatgggattctgtggctgagctggttcattagcagcctgatcccactgctcatcagcgcc
gccctgctggtcctcatcctgaagatggggaatcttctgccctacagtgacccgggtgtg
gtctatctcttcctggtctccttcgccatcgtcaccatcatgcaatgtttcctgatcagc
acgctgttctctcgggccaatctggcagccgcctgtgggggcatcatctacttcaccctg
tacctgccctacgtcctgtgcgtggcctggcaggactacgtcggcttcggggccaaagtg
gtcgtgagcctgttgtctccggtggcgttcggttttggctgtgagtactttgcgctgttt
gaggagcagggagtgggcattcagtgggataacctgttgtccagccccatgcaggaggac
aactacagcctcactacctccatcttgctcatgctaatagatgctgtgctgtatgccatc
atgacatggtatattgaggctgtcttcccaggtcaatatggcattccccggccgtggtat
tttcccctcaccaaatcttactggtgtggagagaaatgcggctggacaacagcttcctcc
accaacaagaaagaaaatgcagaagcggtgtgcattgaggaggtaccagctgatctggaa
cctggtgtctacattgagaatctggtgaaggtgtacagacatggcaacaagctggcagta
gatgacctcactttgggcttctatgaggatcagatcacctccttcctgggccacaatgga
gcaggaaagaccaccaccatgtccattctgactggactgttccctcccacatctggcacg
gcttacattatgggcaaagacattcgttcagatctaagcgccatccgtcagaacctggga
gtgtgtccacagcacaatgtcctgttcagcatgttgacggtagaagagcacatctggttc
tatgctcgcctgaagggcctatcagaggagaaggtgaagtctgagatggaccagatcgtt
accgacttaggcctccctcacaaacgcaaatctcgtactagtcagctttcaggaggaatg
caaaggaaactctctgttgctttggcatttgtcggaggttcaaaggttgtgatactggat
gagcccacagctggggttgatccgtacgctcgcaggggcatctgggacctgctgctcaag
tatcgtcaaggtcgaaccatcatcctctccacccatcacatggacgaggctgacattttg
ggcgaccgcatagccatcatctctcatgggaagctgtgttgtgtgggatcctccctcttc
ctgaagactcagctgggcactgggtactacctaactctggtcaagagggatttcgaccca
tctctgagttcatgtcgcaactccagcagcaccgtgtcctattccaagaacagtctcaag
aaggatgacagtgtctctgaaagcagctctgatgccggccttggaagtgaccatgaaagt
gaaaccaccaccattgacatctccctgatctccaacgtcatcttcaagcacgttccctca
gcgagactggtggaggatctgggccatgagatcacctatgtgctgccttatgaagcagcg
aaggacggtgcctttgtggagctcttccacgagattgatgatcgcctcatcgacctcggc
atctccagctatggaatttcagacaccacgctcgaggagatcttcctgaaagttgcggat
gataacggagttgatgctgtaacctcggatggcactattcttccaagaaggcaccgccgg
cacgcatttggtgaccatcagagctgtctgaaacccttcactgaggatgacagctttgac
ttcaatgattcggaaggtgatccagaatcccgtgagacggattggttaggagtctctgat
ggaaaaggctcataccaggtcaaaggttggagtctgaagagacagcagtttgtggcttta
ctctggaaacgtttcctgtatgcccgtcgctctcggaaaggattctttgctcagattgtt
cttccagctgtgttcgtgtgcattgccctggtcttcagtctaatagtgccacctttcgga
aagtacccaagcctggagctggagcccagcatgtatgaggagcagtactctttcatcagt
aatgatgcaccagaggagatgcacactaacaagctactcggagcgttaacagacagtccg
gcctacagtgggcggtgttcagaggatgggatgcctggagatgggtcatgctcaattaga
gaaagtgagtggacggttcctgagattcccaagaccgtatcggacatttttcagaccgga
aactggaccatggaaaacccatcacctctctgtgagtgcagctgtgaggagaagaagaag
atgctgccggagtgtccaccaggagcaggcggcctgccaccaccacagatcaaagtcagc
agtacagaaacattgcagaatctaactgggaggaatatttccgactacctggtgaaaacc
tatgcacagatcattggaaagagtttgaagaacaaactctgggtgaatgagttcagatac
ggtggattctcattgggcgccagaagttcacaaggcctgccccctgcagatgagatctcc
aaggctatcgctcttatgcatgctcgtttcaacttggaaaggggcactgcagcagacagg
tttctgagaggtttatcgagcttcatcggtggcctggacaccaagaacaatgtcaagatc
tggttcaataataaaggctggcacagcatcgctgctttcctcaatgtgatgaacaacggt
atcctgcgtgccagtctgcccaccggtctaaaccccgccaaatttgctatcagagctttt
aaccacccgctgaacctcactaaagagcagctctctcaggtggccttgatgaccacctca
gtcgacgttctggtctccatctgcgtcatcttcgccatgtccttcgtcccggccagcttt
gttgtcttcctcattcaggagagagtgaataaagccaagcacatgcagttcatcagcgga
gttcagcctttcctctactggctcgcaaactttgtgtgggatatgtgtaactacatcgtc
cctgcaaccctcgtcatcatcatcttcgtctgcttccagcaggaggcctacgtgtcctcc
accaacctgcctgtcctcgctctccttttactcctttatggctggtccataactcctctg
atgtacccagcatcgttcttctttaagatccccagcacggcctacgtggtcctaaccagc
gtcaacatcctcattggaatcaacggcagcgtgtccaccttcgtcctggagctttttggt
ggcaatgagattggtggcatcaatgacattttgaaaaatgtcttcctgatcttccctcac
ttctgcctgggacgtgggctgatcgatatggtgaagaaccaggccatggctgatgctctg
gagagattcggtgagaatcggttccgttctcctctggcatgggacatggtggggaagaac
ctctttgctatggcagtggaaggcgtggtcttcttctgcattacagtgctcatacagtat
cgcttttgcatcaaggccagaggcattagtgctcatctgaagccgattaacgaggaggac
gaggacgtggccagggagaggcaaaggattctgggtggaggtgggcagagtgacatcctg
gagctcagacagctgaccaaggtgtataaaaggaagcagaagccagcggtggacagactg
tgtgttggaattccacgtggagagtgttttggattgcttggtgtgaatggtgctggaaaa
acaagtaccttcaagatgctcactggagattcagtcatcacgagcggagaggcttattta
gctggcaagagcgtgctgacggagatcgatgaggtgcatcagaacatgggctactgtcct
cagtttgacgccatcaacgacctgctgactggccgagagcacctggagttttacgccatt
ctacgtggtgtgccggaaaaagaagtgtgtgaggtggcggagtggggaatccgtaaactg
ggtctggtgaaatatgtggacaaatcagcaggaagctacagtggaggaaacatgcgcaaa
ctctccacggccatcgcactgattggaggaccacccgtggtgttcctggatgaacccacg
actggtatggaccccaaagcacgacgcgctctgtggaactgtatcctcagcatcattaaa
gagggacgttccgtcgttctcacctcacacagtatggaggagtgtgaggctctgtgcact
cgcatggccatcatggtcaatggcaggttccgctgcctggggagtgttcagcatctaaag
aacaggtttggtgatggctacacgatcatcctgcgcgtagcaggttccgagcctcgtctg
gagccggtgatggagctgatcgagcgtgagttacctggcagcatcctgaaggagaaacac
aggaacatgctgcagtaccagcttccatcatcgctttcctcgttggctcggatcttcagc
atcctgtccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccaca
ctagaccaagtttttgtcaattttgccaaggaccaaagtgatgaggaccatgtcaaagac
atttccataaacaagagcgatgctgtggtggacttttcaaacctggacgctttccttatg
gacgctaaagcgcaggagacggtggtgtga
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integrated database retrieval system
