Pangasianodon hypophthalmus (striped catfish): 113524576
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Entry
113524576 CDS
T05759
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113524576 (cfap52)
Cilium and associated proteins [BR:
phyp03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
113524576 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML
WD40_MABP1-WDR62_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_HPS5
WD40_like
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
PEP5_VPS11_N
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
113524576
NCBI-ProteinID:
XP_026766688
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MAAEEQEILKLQLEAVIGFNGHVFSGLRVHPDREHLIYPLGCTLIIKNLRDGKQGFLHGH
TNNISCVSVSRSGTYVASGQVTFMGFKADVIIWDYAKRDVHARLVLHKAKVETLAFSPNE
KYLVSLGGQDDGSIVVWNVEKKEAICGSPASAHSAGHCLTINYCNLSDDVFVSAGHGTLR
VWELDLPNRKIRPTECQTGQLKRIIKCIEMSEDDAFFYCGTTSGDVLKVNLKSRLLNSYG
PMKHKFSKGVNALKMLKTGDLLVGSGDGTFSICSSTNFKTIKSVTLEGGVTSVALRGEGQ
QVFVGTEACQIYRFGYTDFTPELISTSHSSAVWDAAFPVGTSELFATCSQDDIRVWHTET
SKELLRIRVPNMTCNALGFMRDGRSIYSAWNDGKIRLFTPESGRLMLMIPSAHSMGVTAL
TSTSDCTRLVSGGGEGQVGLINLLFLIYYCCTNALLQL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagagcaggagattctgaaactacaactcgaagctgttattgggttcaac
ggtcacgtgttctcgggcctgcgagtccacccggaccgcgagcacctgatctacccgctc
ggctgcacgctgatcatcaagaacctgcgggacgggaagcagggcttcctccacggacac
accaacaacatctcctgcgtgtctgtgtcccggagcgggacgtacgtggcgtcaggacag
gtcaccttcatgggctttaaggctgacgtgataatctgggattacgctaaaagagacgtt
cacgctcggctcgtcctccacaaagccaaagtggagacgcttgctttctctccgaatgag
aaatacctggtgtctctgggaggacaagacgacggcagtatcgtggtctggaacgtggag
aagaaggaggcgatctgcgggagtccggcgtcggctcacagcgcaggtcactgtctcacc
atcaactactgcaacctcagcgatgacgtcttcgtctcagccggacatggtacgctccgt
gtgtgggagctcgacctccccaacaggaagatccgccccactgagtgtcagacggggcag
ttaaagaggattatcaagtgcatagagatgtccgaggacgacgctttcttttactgcggc
accacgagcggagacgtcctcaaagtgaacctgaagagtcgcctgctgaacagctacggt
ccgatgaagcacaaattcagcaaaggtgtaaatgctctgaagatgttgaagacaggagat
ttgttggtgggatcaggagacggaacgttcagcatctgctccagcaccaacttcaaaacc
atcaagagtgtgacgctggagggcggcgtgacgtccgtggctctgcgtggtgaaggtcag
caggtgtttgtgggcactgaggcgtgtcagatttacaggttcggctacacggacttcacg
ccggagctcatctccaccagccacagcagtgcggtttgggacgcagcctttcccgtagga
acgtcggagctcttcgccacttgttctcaggatgatatccgtgtttggcacacggagacc
agtaaagagcttttacggatccgcgtcccgaacatgacgtgtaacgcgctcggcttcatg
cgggacggccggagcatctacagcgcgtggaatgatgggaaaatccggctgttcactccc
gagagcggccgtctgatgctgatgatccccagcgctcacagtatgggcgtgacggcgtta
acgagcaccagcgactgcacacgcctcgttagtggaggaggagagggacaggtgggatta
ataaatctgttattcctcatctattactgctgtacaaatgctttattacagctatga
DBGET
integrated database retrieval system
