Pangasianodon hypophthalmus (striped catfish): 113524581
Help
Entry
113524581 CDS
T05759
Name
(RefSeq) tripartite motif-containing protein 2-like
KO
K11997
tripartite motif-containing protein 2/3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113524581
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113524581
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
TEN_NHL
ANCHR-like_BBOX
Beta-prop_IFT122_1st
Mala_s_1-like
zf-B_box_ZFPL1
ECH_2
FapA
SPC25_N
NPV_P10
Motif
Other DBs
NCBI-GeneID:
113524581
NCBI-ProteinID:
XP_026766694
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MEAQQGSPDSSSEECTVLEAFPGKGTICSQHKGKALAFYCLPCESAVCEECIEGEHADHL
TDSLETIVAQQRTALHERLNAAQNRLPQIRDAVQTLKDILQQLSTQKNCIEEDIHFSFSE
LHKTLDTRKSVLLMELEVTYGLKQKVLQNQLDTLLKEEAEISSNCSQTGEALDGASEAVV
LQTHKDFGERLSELASQGLPLQPEENDQLELMMEVEGLRKSIHNLGAIITTNAVASQTEA
SGDGLEQCIVGQPTSIIITTRDKSGGLCKSGNAVISGEVFTPDGSVMDGEILDHKNGTYE
FLYTLHKEGDFSLALRLYDQHIKGSPFRLKVTSSPDDSPTTTSGANAASTGSSDGGARRR
SAKSPGSRSRQKGLRRGGSLFSTPKKKVNPIEDDLIFRIGTKGRNKGEFTNLQGVAASSG
SILIADSNNQCVQIFSNEGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKWVS
IFSSDGKYKAKLGSGRLMGPKGVSVDQNGHVIVVDNKACMVFIFQPSGKLVTKFGSRGNG
DKQFAGPHFAAVNNNNEIIVTDFHNHSVKVFSAEGEFLLKFGSNGEGNGQFNAPTGVAVD
VNGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGPQGLALTSDGHVVVADSGNHCFK
VYRYLQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacagcaaggttctccggacagcagcagtgaggaatgtaccgttctggaggct
tttcctggcaaaggaaccatttgctctcaacataaaggaaaagccctagcattttattgc
ctgccgtgtgagagtgctgtgtgtgaggagtgtattgagggggaacatgccgaccacctg
acagattcactggaaacaattgtggcacaacagcgaacagctttgcacgaaagactgaat
gcagctcagaacaggcttccccagatcagagatgctgtacagacactgaaggacatcctg
cagcagctgagcactcagaagaactgtatcgaggaggacatccacttctcctttagtgag
ctgcacaagaccctggacacacgtaagagtgtcctgctcatggagctagaggtcacctat
ggattaaagcagaaggtactgcagaatcagttagacactctgcttaaagaggaggctgaa
atcagcagtaactgtagtcagacaggagaggcgttggatggggcaagtgaggctgttgtt
ctgcagactcataaagactttggagagcgactgagtgagctggccagtcagggccttccc
ctccaacctgaggagaacgatcagctggagcttatgatggaagtggaaggacttcgtaag
tccatccacaacctgggtgccattatcaccaccaatgcggtagccagccagactgaggct
tcaggagatggtctagagcaatgcattgtaggtcagccaacctccatcatcataaccacc
agagacaagtcagggggcctgtgcaagtcaggcaatgctgtcatctcgggagaagtcttc
acacctgatggcagtgtcatggatggagagattttggatcataagaatggcacctatgag
ttcctgtacacgttgcacaaggagggggactttagtctggcgctgagactctatgatcag
cacatcaagggaagccccttccggctgaaggtcaccagttctccagacgattctcccacc
accacgtctggagccaacgctgcctccacaggctccagtgatggtggtgcgaggagacgg
agtgccaagtccccgggtagcaggagccgacagaaagggctgcgcagaggtgggagcttg
ttcagcacacccaagaagaaagtaaatcccattgaagatgatcttatcttcagaatcgga
acaaaaggaaggaataaaggtgaattcaccaatctacagggtgtagctgcctcatcagga
agtatcctgattgcagacagtaataatcagtgtgtgcagatcttctccaatgagggagag
tttcagagccggtttggagttcgtggccgttcaccggggcagctgcagaggcccactggt
gtcgctgtgcatccaaatggtgacattatcatcgctgactatgataacaagtgggttagc
atcttctccagtgatggcaaatacaaggctaagctggggtctggtaggctgatgggtcca
aagggcgtctctgtggatcagaatggtcacgttattgttgtggacaacaaggcctgtatg
gtgttcatcttccagcccagtgggaaacttgtaacaaagtttggcagcagaggaaacggt
gacaaacagttcgcaggaccccattttgctgcagtcaacaataataatgaaataattgtc
actgactttcacaatcattcagtcaaggtgttcagtgctgaaggtgagttcctgctcaaa
tttggctcaaacggtgaaggcaacggtcagttcaatgctcccacaggcgtcgcagtggac
gttaacgggaatatcatcgtagctgactggggaaacagtcgcatacaggtgtttgatgga
agcggttcttttctgtcctacatcaacacagcggcggatcctctttacgggccgcagggt
ctcgccctgacctctgacggccatgttgttgtggctgactccggtaatcactgttttaag
gtgtaccgttaccttcagtga
DBGET
integrated database retrieval system
