Pangasianodon hypophthalmus (striped catfish): 113524589
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Entry
113524589 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
phyp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524589
04082 Neuroactive ligand signaling
113524589
04519 Cadherin signaling
113524589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524589
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113524589
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
113524589
NCBI-ProteinID:
XP_026766706
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MKMMMRMRRMMMVSPRLPAMALPELFLRLFLCAQLISSSLQTENDDDEVTNKTWVLTPKV
YESDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTW
YDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYT
LRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIIYKWKRSSVEVGDIRSWRLYQFS
FVGLRNISDVVSTFSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV
PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFVS
NRKPSKNKDKKKKNPLLRLFPSKQNPTVDIRPRSATAIQMNNATHMQERDEEFGYECLDG
KDCTSFFCCFEDCRSGAWRHGRLHIRIAKIDSYARIFFPTAFGLFNLVYWVSYLYLNSNR
ICRAMRRDEHVAGVNENE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgaggatgaggaggatgatgatggtttctccgcgtctgcctgccatg
gctctccctgagctcttcctcagactcttcctctgcgctcagctcatctccagttccctc
caaacagaaaacgatgacgatgaagtgacaaacaaaacctgggtgttgaccccgaaggtg
tacgagagtgacgtcacacacattctcaacagtttactagacggatatgacaacaagctg
aggccggatataggagtcaaacccactgtgatccacacggacatgtttgttaatagcatc
gggcctgtaaatgcaatcaacatggaatacaccatcgacatcttcttcgctcagacctgg
tacgacagacgcctgaagttcaacagcaccatgaaggttctgcgtctcaacagcaacatg
gtgggaaagatctggatccctgacaccttcttccggaactccaagaaggccgacgcccac
tggatcaccacgcccaatcgcatgctccggatctggaacgatgggcggatcctgtacacg
ctgaggttgaccatcgatgccgagtgccagcttaaactgaataactttcccatggatgag
cattcctgtcccctggagttctcgagctacggctacccgaaggaggagatcatttataag
tggaagcggagttccgtcgaggtcggagacatccgctcctggagactgtatcagttctcc
ttcgtgggtctgaggaacatttcagatgtcgtcagcaccttctcaggtgactacgtggtg
ctgaccgtcttcttcgacctgagcaggaggatgggctacttcaccatccagacctacatc
ccctgcaccctgatcgtcgtcctgtcctgggtctccttctggatcaacaaggacgccgtc
cctgctcgcacatccttaggaatcaccacggtgctcaccatgacaacgctcagcaccatc
gccaggaagtcgctgcccaaagtgtcgtacgtgacggccatggacctcttcgtgtccgtg
tgcttcatcttcgtgttcgcggcgctgatcgagtacgggacgctgcactacttcgtgagc
aaccgcaaaccgagcaaaaacaaagacaagaagaagaaaaacccgctcctccggctcttt
ccctcaaagcagaacccgacggtggatatccgtccccgctcggcaacggcgatccagatg
aacaacgccacgcacatgcaggagcgcgacgaggagttcggctacgagtgtctggatggg
aaagactgcacaagcttcttctgctgctttgaggattgtcgctcgggagcgtggcgtcac
ggccgcctgcacatccgcatcgccaagatcgactcgtacgcgcgcatcttcttccccacc
gccttcggcctcttcaacctcgtctactgggtgtcgtacctgtacctgaactcaaatcga
atctgcagagcaatgagacgagacgaacacgtcgccggtgtgaatgaaaatgaatga
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