Pangasianodon hypophthalmus (striped catfish): 113524590
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Entry
113524590 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524590
04082 Neuroactive ligand signaling
113524590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524590
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113524590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
113524590
NCBI-ProteinID:
XP_026766715
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MWARLGAAWIWAWLLAVNVLGKSSNQNGSDEQKDNTTVFTRILDSLLDGYDNRLRPGLGE
RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWT
PDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLK
FGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQTVDSGVVQSSTGEYVVMTTH
FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLK
KNNTYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPAEAKKTFNSVSKIDR
IARIAFPLLFGTFNLVYWATYLNKKPKIQDALTPH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctcgactgggagcggcgtggatctgggcctggttactggcggtcaacgttctg
ggcaaaagctcgaatcagaacggatcagacgagcagaaggacaacaccaccgtcttcacc
cgcatcctggacagtctgctggacggctacgataaccgcctcaggccgggactcggagag
cgcgtgaccgaggtgaagaccgacatcttcgtgacgagcatcggccccgtctccgatcac
gacatggaatacaccatagacgtgttcttcagacagagctggaaggacgagcgtttgaag
tttaaaggtccgatggccgtgctgcgcctcaataacctgatggccagtaagatctggacc
cccgatacgttcttccacaacggcaagaaatccgtagcacacaacatgaccatgcccaat
aaactgctgcgcatcacagaggagggaacgctgctctacaccatgaggttgacggtgaga
gctgagtgcccgatgcacttggaggatttccccatggatgctcacgcctgtccgcttaaa
ttcggcagctatgcctacacgcgggccgaggtggtgtacgtgtggacgagaggagcggct
cagtcagtggtggtggctgaagacggatcgcgactgaatcagtacgacctgatgggacag
acggtggactcgggcgtcgtccagtccagcaccggcgagtacgttgtcatgacgacgcac
ttccacctgaaaaggaagatcggctactttgtcattcagacgtatctgccgtgcatcatg
accgtcatcctgtcacaggtctccttctggctcaacagagaatccgttcctgccagaact
gtgtttggagtgaccactgtcctgaccatgaccactctgagtatcagcgctagaaactct
ctgcccaaagtggcctacgccaccgctatggactggttcatcgccgtctgctacgccttt
gtgttctccgccctcatcgaattcgccaccgtcaactatttcacaaagaggggctatgcg
tgggacgggaagagcgtcgtacctgaaaagcaaaagaagaaaaaggagtctctcctgaag
aagaacaacacctacacagctgccacggcaaccgctttcgcccccaacatcgccagagat
ccaggattagcgaccatcgccaaaagcgcacctcctccaccaaccgagccgaaagaagag
ccgaaacccaaaccggctgaggcgaagaaaacgttcaacagtgtgagcaaaatcgaccgg
atcgccagaatagcgtttcctctgctctttggtacctttaacctggtctactgggcgact
tatctaaataaaaaacccaaaattcaagatgcgctaacacctcactaa
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