Pangasianodon hypophthalmus (striped catfish): 113524599
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Entry
113524599 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524599
04082 Neuroactive ligand signaling
113524599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524599
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113524599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
113524599
NCBI-ProteinID:
XP_026766725
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MAVFRRRRKWSWVRIWVLFVMVAAVWAQSVSALSNMSLVKETVDRLLKGYDIRLRPDFGG
PPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGENSAVAGVERIELPQFSIVDYKLIAKKVVFSTGAYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGQGPQRQKKAAEKASNANNEKLRMDP
NKWLMGNVVQRNDALYARMKPRDIDAHDSMWEPIFVDDAAIGLGEQKNKMDPHENILLTP
LEMKNEMSPSELALGLGDPRSTMLAYDSSALQYRKAGLARQNFGRNALERHVAQKKSRLR
RRASQLKITIPDLTDVNSIDKWSRMIFPTVFSFFNVVYWLYYIN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttttcggaggaggagaaaatggagctgggttcggatttgggttttatttgtg
atggtggctgcggtttgggcgcaaagtgtcagtgctctcagcaatatgtctctggtgaag
gaaactgtggacaggctgctgaaaggatacgacatccggctcagacccgacttcggaggt
cctcccgtgagagtgggcatgaacatcgatatcgccagcatagacatggtgtcagaagtc
aacatggactacaccctgaccatgtacttccagcaggcgtggagagataaacgcctctcg
tactcggagatccctctcaacctcacgctggataatcgggtggccgatcagctgtgggtc
ccggacacgtacttcctaaacgacaaaaagtccttcgttcatggtgtgacggtgaaaaac
aggatgatccgcctccatccggacggcacggtgctctacgggctgaggatcactacaacc
gcggcctgcatgatggatttgagacgatatccgctggacgaacaaaactgtactctggaa
atcgagagctacggctacacgacggatgacatcgagttttactggcgaggagaaaacagc
gccgtggcaggagtggagagaatcgagctgcctcagttctccatcgtcgactacaagctc
atagccaagaaggtggttttctctacaggtgcgtaccctcgcctgtccctcagcttcaag
ctgaagaggaacatcggctacttcatcctgcagacctacatgccctccatcctgatcacc
atcctgtcctgggtctccttctggatcaactacgacgcctccgcagcccgagtcgcttta
ggtattacgaccgtgctcaccatgacgaccatcaacacacacctgcgagagacgctgcct
aaaatcccgtacgtcaaagccatcgacatgtacctgatgggctgcttcgtcttcgtcttc
ctcgccctgctcgagtacgcgctcgtcaactacatcttcttcggacagggacctcagcgg
cagaagaaagcggcggagaaagcgtccaacgccaacaacgagaaactcaggatggatccc
aacaagtggttgatgggaaatgtagttcagagaaacgatgctctgtatgccagaatgaaa
ccgagggatattgacgctcatgactcgatgtgggaaccgatctttgtggacgatgcggcg
ataggactaggcgagcaaaaaaataagatggaccctcatgagaacatcctcctcacgcct
ctggagatgaagaacgagatgtctccgtctgagttagctctgggtctcggcgacccgcgc
agcaccatgctagcgtacgacagctcggcgctacagtaccggaaagcgggactcgctcgg
cagaacttcggacggaacgcgctggaacgtcacgtcgctcagaagaaaagtcggctgcgg
agacgcgcctcgcagctgaagatcaccatccccgacttgactgacgtgaactcgatcgac
aagtggtcgaggatgatcttccccaccgtcttttccttcttcaacgtcgtctactggctc
tactacatcaactga
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