Pangasianodon hypophthalmus (striped catfish): 113524604
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Entry
113524604 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524604
04082 Neuroactive ligand signaling
113524604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524604
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113524604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
113524604
NCBI-ProteinID:
XP_026766730
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MALIHTLILLSCAGKVWSKSGPAESRVYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKT
DIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLRFEGPIEILRLNNLMVSKIWTPDTFFRN
GKRSIAHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYP
MSEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSEKLKSNTGEYIVMTVHFHLQRKM
GFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFSTVQANRERRRANAARAAMAAAAKSEAKDVTSL
VDPSSVLKKRLNSVPQKENSTVPASPVPDSRQQGSATPTNATLTGTSIIDKYSRILFPLS
FGAFNLVYWIVYLTKDPMETREE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatacacactctcattctgctctcatgcgccgggaaagtttggtccaaatcc
ggcccggctgagtctcgagtctatctggacaacatcacacggattctggacagattgctg
gacggatacgacaacagactgcgacccggatttggaggtcccgtcacagaagtcaagacg
gacatcttcgtcaccagcttcggtcccgtgtctgacgtggaaatggagtacaccatggac
gtgtttttccgtcagacgtggatagacgagcgtctgcggttcgagggtcccatcgagatc
ctgcgtctcaacaacctgatggtcagcaagatctggactccggatacgtttttccgaaac
ggcaaacgctccatcgctcacaacatgacgactccgaacaagctgttccgcatcatgcag
aacggaaccatcctctacaccatgagattaaccatcaatgctgagtgtcccatgaggctc
ataaacttccccatggacggtcactcctgtcctctgaagttcggcagctacgcttacccg
atgagtgagatcgtctacacctggaagaaagggcccttattttctgtggaagtgccgcag
gagtcgtccagcctgctgcagtacgacctgatcggacagacggtgtccagcgaaaagctc
aagtccaacacgggtgaatacatcgtcatgaccgttcacttccatttgcagaggaagatg
ggtttcttcctgattcagacctacatcccctgcatcatgaccgtcatcctcgctcaggtt
tccttctggatcaacaaggagtccgttcctgctagaaccgtcttcggcatcactacagtg
ctaacgatgacgacgctgagtattagcgctcgacactcgctgcctaaagtctcctacgcc
accgccatggactggttcatcgccgtctgcttcgctttcgtcttctccgccctcatcgaa
ttcgccgccgtgaactacttctccaccgtgcaggccaaccgagagcgtcgccgtgccaac
gccgcccgagctgccatggcggccgccgccaagagcgaggccaaagatgttacgtcgctg
gtggatcccagcagtgttctgaagaaacggctgaactcggttccgcagaaggagaactcc
acggttcctgcgagtcccgttcctgattcacgtcagcagggttcagccacgcccactaac
gctacgctaaccggcaccagcatcatcgataaatactcacgcatcctcttccctctgtcc
ttcggcgccttcaacctcgtttactggatcgtttacctcaccaaggaccccatggaaaca
agggaggagtga
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