Pangasianodon hypophthalmus (striped catfish): 113524659
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Entry
113524659 CDS
T05759
Symbol
rubcnl
Name
(RefSeq) protein RUBCNL-like
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113524659 (rubcnl)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Other autophagy associated proteins
Others
113524659 (rubcnl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Prp18
VP_N-CPKC
Motif
Other DBs
NCBI-GeneID:
113524659
NCBI-ProteinID:
XP_026766799
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSLLGSCIDSNGCASANFLMRVKNQTVEGDQGKKTDLQPLFGYIPDGQGSISRPEDEGWY
YLPRSSPVISRREETKMKKSPSNNRDLHEHSDENFRKGEDFFWVGLSSVSKMLQNIFPEE
QTIPTPSARRTSQVLLLDTHSASAATRDEKCSDKQRNLSHGTSETQSSSCEESDLLNTGA
SQPEKGTGLNKCLISGAEHEEQISEAFYRNSVDLDQENAHFVVVDMVLEVLEAAKWAVSQ
KHSGSFSSTDSGYEELCDHRLSSNRSSQNLARRCSAEILAQNLLVELERWWISSEELLRE
FPLATVSMAPGGEASLSDEIRQKSRMRGTLLWTPPQFQIISSVNPTQRRSDVIASQQFLC
AGCGTEIEPRYMKRLRYCDYLGKYFCDGCHGGGEAIIPARVLSHWDFGRYPVCQFSKQLL
ESIWEKPLFKITDVAKNLYSQAKELQKFKEIQEQLISIKKLLRACRLSEGVLEEFQQLPS
HLSDELHVYAMDDLVKIKRGHLLTTAKAVMRSATNHVEACELCQAKGFICEFCRGKDVLF
PFQTDICTRCQECRACFHTLCFQDEACPKCARLQIRRAARRN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttgggctcttgcattgattctaatggctgtgcttctgccaatttcctgatg
cgagtaaaaaatcaaactgtggaaggtgaccagggaaaaaagacagacctccaacctcta
tttggatacatcccagatggacaaggctccatttccagacctgaagatgaaggatggtac
tacctacccaggagcagtcctgtcatatcccgccgtgaagagacgaaaatgaagaaatcg
ccttcaaataatagagatttacatgaacactctgatgaaaactttcgaaagggggaggac
tttttttgggttggactttcctctgtttcaaaaatgctccagaacattttcccagaagaa
caaacgattcctactccttcagctcggaggacttctcaggttttgcttttggatacacac
agcgcttcagcagctaccagggacgaaaaatgttctgacaagcaaagaaacctttcacac
ggaacttcagagacccaatcttcttcatgtgaggaaagtgatcttctaaacaccggagcc
tcacaaccggaaaaaggaactggcttgaacaaatgtctgatctcaggtgctgagcacgaa
gagcaaatctcggaagctttctacaggaacagtgtggacctcgaccaggagaacgctcat
tttgtagtggtggatatggtgctggaggttctagaggcggcgaagtgggctgtgtcccaa
aaacattcaggctccttttcctcaactgacagtggctacgaagaactctgtgaccataga
ctttcttcaaacaggagttcccagaatttagcccgcagatgttcagcagaaattctcgca
cagaacttgcttgtggaactcgagaggtggtggatttcctcagaagagctgctacgggaa
tttcccctggctactgtctccatggcaccaggaggcgaagccagcttgagtgacgagatc
cgtcagaaaagccgaatgagggggacactgctgtggactccaccccaatttcagataata
tccagcgtgaatccgacacagaggcgcagtgacgtcattgcctctcagcagttcctttgt
gctggctgtgggacagaaatcgaaccacggtacatgaagaggttgcgatactgtgactac
ctgggcaagtatttttgcgatggttgccacggcggtggcgaagccataatcccagcgcgt
gttttgagccactgggattttggacgatacccagtgtgccagttttccaagcagctactg
gaatccatttgggaaaagccactgtttaagatcaccgatgtagctaagaacctgtactcc
caggccaaggagctgcagaaattcaaggagatccaggagcagctgatctccattaagaag
ctgctaagagcatgcagactatctgaaggagtcctggaggagttccagcagcttccatcc
cacctgagcgacgagctccacgtttatgccatggatgacctcgtcaagatcaaaaggggt
catcttcttaccacggcaaaggcagtgatgcgttctgcgacaaaccacgtggaggcctgt
gagctatgccaggcaaaaggctttatctgtgagttctgccgtggaaaggatgtgctcttc
cccttccagacagacatctgcacacgctgtcaagagtgtagagcttgtttccacactttg
tgtttccaagacgaagcgtgtcctaagtgcgcccgactccagatcagaagagctgccagg
agaaattag
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