Pangasianodon hypophthalmus (striped catfish): 113524675
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Entry
113524675 CDS
T05759
Symbol
lcp1
Name
(RefSeq) plastin-2
KO
K17276
plastin-2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113524675 (lcp1)
04147 Exosome [BR:
phyp04147
]
113524675 (lcp1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
113524675 (lcp1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of microglial cells
113524675 (lcp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
EH
DUF5580
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
113524675
NCBI-ProteinID:
XP_026766824
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MASTGPISADEIEELREAFSKVDLDSNGYISTDELNELFKVANLPLPGYRVREIVQELSQ
TMDQDKDGKITFDEFVKVVHGLKSSEVAKTFRKAINKKEGICAVAGTSEQTGTQHSYSEE
EKVAFVNWVNKALEKDPDCKHVLPMDPSSNDLFTAVGDGIVLCKMINLSVPDTIDERTIN
KKKLTPFTIQENLNLALNSSSAIGCHVVNIGAEDLKEGRQHLVLGLLWQIIKIGLLADIE
ISRNEALIALLRDGENLEDLMKLSPEELLLRWANYHLEQAGCPKINNFSSDIKDSKAYYN
ILNQVAPKGDEEGIPPIPIDMSGLREKDDLKRAELMLEQADRLGCRQFVSATDVVRGNPK
LNLAYVANLFNKYPALKKPENQDIDWSSIEGETREERTFRNWMNSLGVNPRVNHLYVDLA
DALVIFQLYEKIKVPVDWDRVNKPPYPKLGSNMKKLENCNYAVELGKKEAKFSLVGIAGQ
DLNEGNRTLTLALLWQLMRRYTLNILEELGDGQKVNDDTIVQWVNNMLREAGKNTISGFK
DGSISSSLPVLDLIDAIQPGSIRYDLVKTEDLTDEEKLNNAKYAISMARKIGARVYALPE
DLVEVKPKMVMTVFACLMARGMKRV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccagtacaggaccaatttcagctgatgagatagaggagctgcgggaagccttcagc
aaagtcgatctggactctaatggctacatcagcacagatgagctgaacgagctgtttaaa
gtggctaaccttcctctgccgggataccgagttcgcgaaatcgtccaggagctcagtcaa
accatggaccaagacaaggacggcaagatcacgttcgacgagtttgtaaaggtcgttcac
ggactgaagagctccgaggtggccaaaactttccgcaaggccatcaacaagaaggagggg
atctgtgctgtagcgggaacctcagagcagactggcacacagcactcgtactcagaggag
gagaaggtggcatttgtaaactgggtcaacaaggccttagagaaagaccccgactgcaaa
cacgtcctccccatggacccgagctcaaatgatctgttcacagctgtgggagatggcatt
gtactctgtaaaatgatcaacttgtctgtccccgataccatcgatgagagaaccatcaat
aagaagaagctcacacctttcaccatccaggagaatctaaacctggctctgaactcatct
tcggctattggctgccatgttgtgaatatcggagcagaggacctgaaggaaggcaggcaa
catctggttcttggtcttctgtggcagatcatcaaaatcggcctgttagctgatatcgag
atcagcaggaacgaagccttgattgctttgctgagggatggcgagaatctagaggatctg
atgaagctttcccctgaagaactgctcctgcgatgggccaactaccatctggagcaggcc
ggctgcccaaaaattaacaatttcagctctgatattaaggattccaaggcttactacaac
atcctgaaccaggtggctccgaaaggagatgaagaaggcatccctcccatccctatcgac
atgtctggactgagggaaaaggatgacctgaaaagagcagagctcatgctggagcaggcc
gatcgcctcggctgccgtcagtttgtctcagcgactgatgttgtgcgaggaaatcctaaa
cttaacctggcctacgtggccaaccttttcaacaaatatcctgctctgaagaagccagag
aaccaggacattgactggagctccatcgagggtgagaccagggaggaacgcactttccgt
aactggatgaactcccttggagtcaatcctcgtgtcaaccatctctatgtggacctggct
gatgctctggtcatcttccagctctatgagaagatcaaagttcctgtagattgggacaga
gtgaacaaacctccgtatcccaaactcggcagcaacatgaagaagctggagaactgtaac
tacgcagtggaactggggaagaaagaggcgaagttttccctggtgggaatcgccgggcag
gacctgaacgagggcaaccgcacactcactctcgctctgctctggcaactcatgaggagg
tacactctgaacatcctggaagagcttggagatgggcagaaggtcaacgatgacaccatt
gtccagtgggtgaacaacatgctcagggaagccggaaagaacaccatctcaggtttcaag
gatggatccataagcagtagcttgccagtgctggacctcatcgacgccatccagccaggc
tcgattcgctacgatttggtcaagactgaagatcttactgatgaagagaaactcaacaac
gcaaagtatgccatctccatggccaggaagatcggagctcgagtttatgcacttcctgaa
gatttagtggaagtcaagcccaaaatggtgatgacggttttcgcctgcctcatggcccga
ggaatgaagagagtttag
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