Pangasianodon hypophthalmus (striped catfish): 113524849
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Entry
113524849 CDS
T05759
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113524849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113524849
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Others
GGA
113524849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
Cob_adeno_trans
iSirtuin
Motif
Other DBs
NCBI-GeneID:
113524849
NCBI-ProteinID:
XP_026767007
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
VYRPQIATRLLAHKIQSPQEKEALQALTLLEVCMNNCGKRFHSEAAKFRFLNELIKVLSP
KYLGVWSTEQVKQRVTEVFYSWTQWLKDEPKVQEAYSMLKKQGIVKKDPKLPDTIAMPPP
SPRQEVSVFDNDDKSKLLSRLLKSGRPEDLQMANTLIKSTLQEEQEKVEKENRRVNTLQE
VEKCTSQLKLLLSQHHTQPTPEMQDLYERCDRLRSNLFRLASDTVDNNEALAEILRRNDE
LTHVITLYREKTQKPQTETDTRSVHGYRVRISPWLEIKPDFCLQLEDTVNIMSETGQMEM
AYRNEDYITHSASVLSAAKLELQSRSASSNNQPVASGGVPKPCPASSLADITVSLDSVKP
SHIKPITVFNHRGVHVSLHFTKEAPPSHPDVAVIIVSAVNTSPLPVSDFLFLAAVPKNMC
VRLQAATGSTLPPYSPLLPPAALSQILLLSNPLRKPVRLRFRVTLILGQERLQQDGDIDQ
FPQWNSWIHL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgtacaggccccagattgcgacgcgactcttggctcataagatccagtctcctcaggag
aaggaagctcttcaggctctcactttgttggaggtgtgtatgaataattgtgggaaacgt
ttccacagtgaagcggcaaagttcagattcctgaatgaactcattaaagttctgtctcca
aagtatctgggtgtgtggagcacagagcaggtgaagcagagagtgacggaggttttctac
agctggactcagtggttaaaggatgagccaaaggtgcaggaggcgtacagcatgctaaag
aaacaaggaatagtgaaaaaagatcccaaacttcctgacactatcgcaatgcctccaccg
tctccacgacaggaagtgtctgtgtttgataatgatgataaatcaaagctgttgtcacgg
ttactgaagagcggccgtccagaagacctgcagatggctaacactctgataaagagcaca
ctacaagaggagcaggagaaggtggagaaagagaacagacgtgttaatacccttcaggaa
gtggagaagtgcacatcgcagcttaaactcctcctgagccagcaccacacacagcccact
ccggagatgcaggatctgtatgagcgctgtgataggctgagatcaaaccttttccgattg
gccagtgacaccgtggacaacaatgaggctttagctgagatcctgcgcaggaatgatgaa
ctcacacatgtgataactctgtacagagagaaaacacagaaaccacaaacggagacggac
acgagatcagtccatggctatagagtgaggatcagtccatggctggagatcaaacctgat
ttttgtttgcagttggaggacacggtgaacattatgagtgaaacaggacaaatggagatg
gcttacagaaatgaagactacattacccacagtgcatcagtattatcagcagcgaagcta
gagctgcagtccagatcagcttcgagcaacaatcagccagtcgcatcaggtggtgttcct
aaaccctgccctgcttcatccctcgctgacatcactgtctctctggactccgttaagccc
agtcacattaagcctataacagtgtttaatcatcgtggtgtccatgtctctctgcacttc
actaaagaagctcctccgtctcaccctgatgttgccgtcatcatcgtctctgcggttaac
acttcaccacttcctgtttctgacttcctcttcctggctgccgttcccaaaaatatgtgt
gtgaggctgcaggcagctacaggaagcacactgcctccatacagccctctgctgccccct
gctgccctctctcagatactgctgctctccaacccactcaggaagccagtgcgtctgcgt
ttcagagtgactctgattctcggacaggagcgactgcagcaggatggggacatcgatcag
ttccctcagtggaactcttggattcacctttga
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