Pangasianodon hypophthalmus (striped catfish): 113524874
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Entry
113524874 CDS
T05759
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113524874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524874
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113524874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
113524874
NCBI-ProteinID:
XP_026767042
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MLPAKDGDVRLEPSQNSMMANPKKMDLIIPYFADVPCDSNGQRMWWAFLASSMVTFFGGL
FIILLWRTVRYLWTVCCHCNTKKKDVQRVSSVEKKESTVVSEVGWMTSVKDWAGVMISAQ
TLTGRVLVVLVFVLSIGALVIYFIDSSNPIESCQHFDKDFTLQIDMAFNIFFLLYFGLRF
IAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILK
TSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNFQQLSYWECVYLLMVTMSTV
GYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVC
GHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNP
HDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAH
LLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSYIKIEEDTWQKYY
LEGVANEMYTEYLSSAFVGLSFPMVCELCYVKLKLLLIAIEYKSDQRESSTLINPGNHVK
MQEGTLGFFIASDAKEVKRALYYCKACHDDISDPKRIKKCGCKRLTYSKKAGSRRMRLAC
CLGCGEAEHGCSCTSRSTRSNMETPPCALPLSPTSVSDKSATLRSSKSNYNGYIKSTMDA
PAVQQSALSPKKKQRNGGMRTSPNCSPKTIRHDPVLIPSHDQMETMDDNVKRYDSTGMFH
WCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSAVVGLRNLVMPLRASNFHYHELKH
IVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDA
SLQDKECILASLNIKSMQFDDSIGLLQANSQGEMTYFNDNILTLIRTLVTGGATPELEGL
LAEENALRGGYSDTHTLANRDRCRVAQLALYDGPFAQLGEGGCYGDLFCKALKTYNMLCF
GIYRLRDAHLSAPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAAQCRSTLSHSSHS
SHSSSKKSSSVHSISTKHTKSREPRDKPNRKYINTQNRRNKGSTHSLGIL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagctaaagatggtgacgttcggctcgagccctcccaaaactccatgatggcg
aacccgaagaagatggacctgatcatcccatacttcgccgacgtaccgtgcgacagtaat
ggccagcgcatgtggtgggccttcctcgcctcgtccatggttacgttcttcggcggcctc
ttcatcatcctgctgtggaggacggtccggtacctgtggaccgtctgctgccactgcaac
accaaaaaaaaggatgttcagcgggtcagcagtgtggagaagaaggaaagtacggtggtc
agtgaggtgggctggatgacctcggtgaaagactgggccggggtcatgatctccgcacag
acactcaccggacgcgtgctggtggtgctggtgttcgtcctcagtatcggagcgctcgtc
atttacttcatcgactcctccaatccgatcgagtcgtgtcaacactttgataaagacttt
acactgcagatagacatggccttcaacatcttcttcctgctctacttcggcctgcgcttc
atcgcggcgaacgataagctgtggttctggttggaggtgaactcggtggtggatttcttc
accgtgccgccggtgtttgtgtctgtgtatctgaacaggagctggctgggtctgaggttt
ttaagagccttacgactgatacagttctctgaaatattacagtttttaaatatcctgaaa
actagcaattctataaagttggtgaacttgtgctcgatctttattagcacatggctaacc
gctgcaggcttcatacacttggtggaaaactcaggagatccgtgggaaaacttccagaat
ttccagcagctgtcctactgggagtgtgtgtatttgctcatggtgacgatgtccactgtg
ggttacggagacgtgtgtgctaaaactacactcggacgcctcttcatggtcttcttcatc
ctcggaggactggccatgtttgccagctacgtccctgaaatcatagaattaataggaaac
cgtaagaaatatggcggttcctatagtgcagtaaatgggagaaagcatattgtggtgtgc
ggtcacatcactctggaaagtgtttccaacttcctcaaagacttccttcacaaggacagg
gatgatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagttggaa
gccttattcaagcgccacttcactcaggtagagttctaccagggctccgtcctaaatcca
cacgatctggcccgagtcaagattgaatcagcagacgcatgtttaattttagccaataaa
tactgcgcagaccccgacgctgaggatgcgtccaacatcatgagagtgatatctattaaa
aactaccatccaaagatccgcatcatcacccagatgcttcagtatcacaataaggctcac
ttgttgaacatcccgagctggaactggaaggaaggtgatgatgcgatttgtctggcagaa
ctgaagctgggattcatcgctcagagctgcttagcgcaggggctctccaccatgctggct
aatctcttctccatgaggtcatacattaagattgaagaggacacgtggcagaagtattac
ctggaaggagtagctaatgaaatgtacactgagtatctgtccagtgcttttgtgggttta
tcgttccccatggtgtgtgagttgtgttatgtgaagctgaagctcctcctgatagccatc
gagtataaatctgatcagagagagagcagtacacttattaacccgggcaatcatgtaaag
atgcaggaaggaacactgggtttctttatcgccagcgatgccaaagaagtaaagagagct
ctttactactgcaaagcttgtcatgatgacatctcagaccccaaaaggataaagaagtgc
ggctgcaaacgactgacgtattccaagaaggcgggcagccgccgaatgcgcctggcgtgt
tgtttaggttgcggcgaggctgagcacggctgctcgtgcacgtctcgcagcactcgtagt
aacatggagactccgccatgtgccttgcctctttctcccacctctgttagtgataagtcg
gccactttacgctcctctaaaagtaactataacggatatatcaaatcaacgatggacgct
ccggcggtgcagcaatccgctctgtcacctaagaaaaaacaacgcaatggaggaatgaga
acttcacccaactgctctccaaaaactatacggcacgaccctgtgctgatccccagccat
gatcagatggagacgatggacgataacgtgaagaggtacgactccactggaatgttccac
tggtgtccagccaaagacattgagaaggtcatactgacccgtagcgaggcagccatgacg
gttctaagcggtcacgtggtagtgtgtattttcggcgatgtgaagtcggccgtggtgggt
ctgaggaacctggtgatgcctctacgagcgagtaacttccactaccatgagctgaaacac
attgtgtttgtgggatcactggagtacttgaagagggaatgggagacgttacacaacttc
cctaaagtctccattttacctggaactcctctgagcagggcggatctgagagccgtcaac
attaacctttgtgacatgtgtgtgatcctgtcagccaatcagaacaacatcgatgatgca
tctctgcaggataaagagtgtatcctcgcctcgctcaacatcaaatccatgcagtttgat
gacagtataggccttctacaggccaactcacagggtgagatgacgtactttaacgacaat
attctaacgttaataaggacgttagtgacgggcggggccactcccgagctcgagggtttg
ttagcggaggagaacgcactgcgaggtggctacagcgacacacacacactcgccaacagg
gaccggtgtcgagtggcacagctcgccctttacgacgggccattcgcccagctcggggaa
ggtgggtgttatggcgatttattctgtaaagcgttaaagacctacaacatgctgtgtttc
gggatttaccgtttacgagacgctcacctgagcgctccgagtcagtgcaccaaacgctac
gtgatcaccaaccctccgtacgagttcgagttggtccccacagacctgatcttctgttta
atgcagttcgatcacaacgcggctcagtgccgctccacgctctcacactcctcacactcc
tcacactcgtccagtaaaaaaagctcatccgtgcactccatcagcaccaaacacaccaag
agccgagagccacgagacaaacccaacaggaaatacatcaacacacagaaccggagaaat
aaaggttccacacacagtttaggaattttataa
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