Pangasianodon hypophthalmus (striped catfish): 113524876
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Entry
113524876 CDS
T05759
Symbol
polr3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03020
RNA polymerase
phyp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113524876 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113524876 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113524876 (polr3a)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113524876 (polr3a)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113524876 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF3654
Motif
Other DBs
NCBI-GeneID:
113524876
NCBI-ProteinID:
XP_026767044
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRGCETCGKNLADCLGHYGYVDLELPCFHIGYFKAIIGILQMICKTCSRIMLSKE
ERQQFLDYLRRPGLPYLQKRGLKKKISDKCRKRNVCLYCGAFNGRFRGNLSGKRVDFSGR
TVISPDPNLRIDEVAVPVHVAKILTYPEKVTKANMELMRKLVKNGPDVHPGANFIQQRHM
QMKRFLKYGNREKMAQELKLGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF
RFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFL
TGGYLLTLKDTFFDRAKACQIIASILVGKDEKLKIALPHPAIIKPVCLWTGKQIFSLILK
PSKICPVKANLRTKGKQYCGRGEDLCHNDSFVVIQNSELLSGSMDKGTLGSGSKNNIFYI
LLRDWGQVEAADAMSRLARVAPTYLSNRGFSIGIGDVTPGQGLLKAKQELLDAGYKKCDE
YIEALNTGKLQQQPGCTAEETLEHTILQCRYYYXYXYSPSPSQTVCLSAGSFINISQMIA
CVGQQAISGSRVPDGFENRSLPHFEKHSKVRTRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCADEPALSKNELVLTADSIMKRNDFTC
CRDTFLQVRTRTRTRVSECIIMGIPMNIGTGLFKLLHRADKEPNPPQRTLLFDTADFHIP
LAS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggccaaaaagataagccacatctgtttt
gggatgaagtcggcggagcagatgcggcagcaggctcacattcaggtggtcagtaagaac
ctgtacagccaggacacgtctcacacaccgctgccctacggagtgctggaccaccgcatg
gggacgagtgagaaggaccgtggctgtgagacgtgtgggaagaacctggcggattgtttg
ggtcattacggttatgtggatttggagctgccctgcttccacatcggctactttaaagcc
atcatcggcatcctgcagatgatctgtaagacgtgttctcggatcatgctgagtaaagag
gagaggcagcagttcctggattatctgcggcgtcccgggttgccgtacctgcagaaacgc
ggcctgaagaagaaaatctcagacaagtgcaggaagaggaacgtgtgtctttactgcgga
gccttcaacggacgtttccgtggtaacctgagtggaaagagagtggatttttccggaaga
acagtcatctctcccgacccgaacctgaggatcgacgaggtcgctgttcctgtccacgtc
gccaaaatcctcacttacccagagaaggtgaccaaagccaacatggagctgatgaggaag
ctggtgaagaacggaccagacgttcatcctggagcgaacttcatccagcagagacacatg
cagatgaagaggttcctgaagtacgggaacagagagaagatggctcaggagctgaagctg
ggggacgtggtggagagacacatgatcgatggagacatcgtcctgtttaaccgccagccg
tcactacacaaactcagcatcatggcacacatcgcgcgtgtgaaaccccaccggaccttc
cgctttaacgagtgtgtgtgtacgccttataacgccgactttgatggagacgagatgaac
cttcacctgccgcagactgaggaggccaaagctgaggctctcgtactcatggggacgaaa
gctaacctggtcaccccaaggaatggtgaacctctgatcgctgctattcaggactttctc
acaggtggttatcttctcactctgaaggacacgttcttcgatcgagctaaagcctgtcag
atcatcgcctccatcctggtgggcaaagacgagaagctcaaaatcgccctccctcaccct
gctattataaagcccgtgtgtttgtggacagggaagcagatctttagtttaatcctgaag
cccagtaagatctgcccggtgaaggcgaacctgagaaccaaaggcaaacagtactgcggc
cgaggagaggacctgtgtcacaacgactccttcgtggtgatccagaacagtgagttactg
agtggcagtatggataaaggcacgctgggttcagggtcaaagaacaatatcttctacatc
ctgctgagagactggggtcaggtggaggcagctgacgccatgagccgcctcgcccgagtc
gcacccacatacctctctaaccgtgggttctccatcgggatcggggacgtgacccctggt
cagggtctgctgaaggccaaacaggaactgctcgatgccgggtacaagaagtgtgacgag
tacatcgaggccctgaatacaggaaaactacagcaacagccgggttgtacagctgaggag
acgctggagcacacaatactacagtgcagatactactactaatattaatactctccctca
ccctctcaaactgtctgtctgtctgcaggctcctttattaacatctctcagatgatagcg
tgtgtgggtcagcaggccatcagcggctctcgagttcccgatggatttgagaatcgatcg
ctgccgcactttgagaaacactcaaaagtaagaacaaggcgtttggtgaagtctctggag
gatctgtgctctcagtatgacctcaccgtgcgcagctccaccggtgacatcatccagttc
atctacggaggagacggactcgaccccgctgccatggagggcaaagacgaaccgctcgag
ttcaagagagtgctggataacatccgggcggtctacacctgtgctgatgaacctgctctg
agtaaaaacgagctggtgctgaccgctgactccatcatgaagaggaacgacttcacctgc
tgcagagacaccttcttacaggtacgcacacgcacacgcacacgtgtgtctgagtgtata
ataatgggaatccccatgaacattggcactggtctgtttaaactcttacacagagcagac
aaagaacccaatcctccacagagaaccctgctgtttgacacagctgacttccatatacca
ctggcctcctag
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