Pangasianodon hypophthalmus (striped catfish): 113524928
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Entry
113524928 CDS
T05759
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113524928
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113524928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113524928
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113524928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_2
Fibrinogen_C
EGF_Tenascin
fn3
hEGF
EGF
FN3_Tor_3rd
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Ig_J
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
113524928
NCBI-ProteinID:
XP_026767120
LinkDB
All DBs
Position
Unknown
AA seq
2268 aa
AA seq
DB search
MPFLLHLILFLIPSPALFSHSASVPSESLPVKMVISEQCVSDPNKVEGHEVDLTPGSPLV
LTHRIHLVPGSASGSCCQSEFGALQERIEVLEREVSELREKCGGLDGGCCTSQQSKGAGC
TTVPPPTDECLNDCSDQGRCVDGKCVCFPGFSGPDCSVLNCPRDCSNKGKCVNGKCVCDP
GFTGPDCSVKTCPKNCSSNGRCVNGRCVCNAGFTGPDCSTVQCPGNCNNKGRCVNGKCVC
DTGFTGPDCSERSCPGNCNNKGKCVNGKCVCNTGFTGPDCSERSCPGNCNNKGRCVNGKC
VCDTGFTGPDCSERSCPRNCNNKGRCVNGKCVCDTGFTGPDCSERSCPGNCNNKGRCVDG
KCVCNTGFTGPDCSERSCPGNCNNNGRCVNGKCVCDEGFTGPDCSERSCPGNCNNKGRCV
NGKCVCNEGFTGPACSERSCPGNCNNKGRCVNGKCVCEEGFTGLDCSERSCPGNCNNKGR
CVNGKCVCDTGFTGPDCSERSCPNNCSNKGRCVNGQCVCDVGFTGPDCSTKTCPNNCSNR
GRCVNGKCVCNPSFAEPDCRECKDGFTGPDCATALIAVSHFSTRNITESSVTLFWTPPIV
QYNTYRITFTSEKESDQKITATVNGGFSTYTQVGLAPGQRYTVTIVGEKDGRMGAKSTTT
FQTLISGPKNLQVVKTSTTSVIVQWEEAQGEIDRYVLSISPNQTDGSGKGIPEMRLPPER
DSAQIDGMEPGRLYDISLVAEKDGTLSLPATVQATPDRLAGFSGEVRPLDGKGPKLQDGR
FEVVHQRKEGAHQTATFSEHPKRMSIQEVKTRTTPSPSLPLPTNQVQPSLVRSETQDQPT
YKRQTPSRDRHHAKTSLQVPPSPKYRYSGRPKLSGSSTSLLNSRQPTKSISSRTSSQMPE
YKNPAGNVSFLPSSHPFGVGKETLKRKKTASQEPQPDDQGLLTEPVPGFNRDSSVTNLPE
GTTDTENTNGDNFPKYKETINKTVPLYHRMSHMGTFPRQPNIGPFRSNRTSTPQHPYRSL
LRRPILPRVNSTARNKVEPEMISSNLNPNHTLKFTWKGKNGTVIRLPPKLLSRIKTNFKN
GSKAGVTVDKNTSKESNIVFPADNDADPKFNLSLSTYKAPSKSNDTIQTVSRGSENTIDH
ILPRVTNRDNSTTWHTIPHHQRVSGVISGRQNASNLKIRPTIVLKRKNNTVIRLPSKPYT
RINVNSTTIHSLLKDSKYGIRHKDSKDASKESQIGLSKDTDTNLFANITLSTEAPMGTNE
TLQAINGGSENAIDHRNKEHNLPSITNRDQDLPRVTPRDHELSKTAVRDHDLPRVTNRDQ
DLPRVTSRDQEISKIANRDQDLPRVTSRDINTTIPMLIDQKVESEVVGQRENVPNQNHRT
KIMLRRKDGTLVRTQKKLHTQIKPNSTSIHSGLKDADTKVVKGIKESVILSDKPKAESHY
KLQTVAGGLEVGNDNTLPSITNRDQDLSRITNRDHHLPRVTNKDQDLPSDINRDNSTSMK
QVIKEFKESTEPTVQAVAAGSENGIDNNSTTMQMEPEFNSHSKKGPTSNFTATVTMKKKN
ETVFRNTPKFKIKPNFHGDPKPSKESSTSRHTLPHNTLNRSPRPKSTQQRKNGTIIRPPP
KVSPQLKPKSTTILDGTKGRKHSTDDPKLVWSSKVPLSTDKATSQTNTAFPIAEVSEDSI
NQVGVQNVTSKGFIIIWVAPEGRFKNFVIRIIEENDEGVNEGDGSNQEKEEERTEGSEIT
TNVIEVVRRNSSNDGVRKKFTKLLPGSARSYPVIDLTAQTNYSVTLYGTGRGLRSNVHTF
IITTGPEPPSHLSFSEITDTSLTVSWRRPKSSVSGFKVTYIHTKEGEPISVTVDSSNSNL
ALSKLSPGSTYEVSVISVLGLDESDPIKDFVITLPDPPTDLRAINITDTKALLLWRPALA
TVDQYIITYHSEEAPGSDLSVRVSGNAVEQQLQALKESTKYSVTIISRLGEQKSSSTLTT
FTTTSGSPGKGEAPRDLIAKQVTARSAVLSWKPPASAVTSYKLTYFTKGGERKEVTLNPG
VTEHELRRLRPSSTYTALLQGERGGVYTAAISTEFTTGALRFPYPSDCSQELMNGQKESG
LVEIFPGGKQGQPVMVYCDMETDGGGWTVFQRRKDGKTNFFRSWQEYRKGFGDLEGEFWL
GNDFLHNLTTMTPMNLRVDLRSGDEAVYAHYSTFSLDTMKKHYMLRVSGYSGTAGDSLKY
HDKRPFSTFDRDPQPFITRCSMSYRGGWWYKNCHEANLNGLYNTHTNH
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcctcttgcacctcatcctcttcctcatcccaagccccgccctgttttcccat
agtgcatctgttccctctgagtcactgccggtcaaaatggtgatatcagaacagtgcgtt
tctgaccccaacaaggtcgaaggtcatgaggttgacctgacacccggttctccactagtt
ctgacccaccggattcatttggttcccggttctgcgtccggttcatgctgccagtctgaa
tttggagctcttcaggagcgaatcgaggtgctcgagagggaagtttcagagctcagggag
aaatgtggaggtctggatggcggctgctgcacttcacagcaaagtaaaggagcaggctgc
accactgtccctcccccaacagatgagtgtttgaatgactgcagtgaccagggccgctgc
gtggatgggaagtgtgtgtgtttccctggatttagtggacctgactgcagtgtgctcaac
tgccccagagactgcagcaacaaggggaagtgtgtaaatggcaagtgtgtttgtgatccc
ggcttcacaggcccagactgctctgttaaaacatgccccaaaaattgcagcagcaatggc
aggtgtgtgaatggaagatgtgtgtgcaatgcaggattcacaggtccagactgctcaact
gtacagtgtcctggaaattgcaacaacaaaggaaggtgtgtgaatgggaagtgtgtgtgt
gacaccggattcacaggtccggattgctctgaaaggtcctgtcctggaaattgcaacaac
aaaggcaagtgtgttaatgggaaatgtgtgtgcaatactggattcacaggtccagattgt
tctgaaaggtcctgtcccggaaattgcaacaacaaaggaagatgtgtgaacggaaagtgt
gtgtgtgataccggattcacaggtccggattgttctgaaaggtcctgccccagaaattgc
aacaacaaaggaagatgtgtgaacgggaaatgtgtgtgtgataccggattcacaggtccg
gattgctctgaaaggtcctgccccggaaactgcaataacaaaggcaggtgtgtggatgga
aagtgcgtgtgcaatacgggattcacaggtccagactgctctgaacggtcctgccccgga
aattgcaacaacaatggcaggtgtgtgaatgggaagtgtgtgtgtgatgaaggattcaca
ggtccagactgttcggaacggtcctgccccggaaattgcaacaacaaagggaggtgtgtg
aatgggaagtgtgtgtgtaatgaaggattcacaggtccagcctgctctgaacggtcctgc
cctggaaattgcaacaacaaaggcaggtgtgtgaatgggaagtgtgtgtgtgaggaagga
ttcacaggtctagattgttcggaacggtcctgccccggaaattgcaacaacaaaggcagg
tgtgtgaatgggaagtgtgtgtgtgatactggattcacaggtccagattgttcggaacgg
tcctgccccaataactgcagcaacaaaggcagatgtgtaaatggacaatgtgtgtgtgat
gttggcttcaccggaccagactgttccaccaagacctgcccaaataactgcagcaacaga
ggaagatgtgtaaacggcaagtgtgtgtgtaatcccagttttgctgagccggattgcagg
gagtgtaaggatggatttacaggacctgactgcgcaacggccctgattgcggtgtctcac
ttcagcaccagaaacatcaccgaatcttcagttacactcttctggactccacctatagtg
cagtacaacacttaccgtatcaccttcaccagtgagaaagaaagcgatcagaagatcaca
gccacggtgaatggcggattcagcacctacactcaggtgggcctggctcctgggcagcgg
tacaccgtgaccatcgttggggagaaagatggcaggatgggcgccaagagcacaacaacc
ttccaaaccttgatctctggccccaaaaatcttcaagtcgtcaagacaagcacaacttct
gtcatcgtccaatgggaggaagcacagggagaaatcgacagatacgtcctctccatttca
ccaaatcagacggatggatctggcaagggaattccagagatgaggttgccacccgagaga
gactctgctcaaatcgatggcatggagcctggtcgtttgtatgacatttctctggtcgca
gaaaaagatggcactctgagcctgccagcaaccgtgcaagcaacccctgacaggctggcg
ggtttttctggtgaggtcaggccattagatggaaaaggaccgaagttacaggatggaaga
tttgaagtagtacatcagcggaaggagggggctcatcaaacagcaacattttcagagcac
cccaaaaggatgagcatacaagaagtgaaaactaggacaaccccatcaccctctcttcct
ttacccacgaatcaggtccaaccttctctggtgcgatctgaaacacaggaccaacctaca
tacaagagacagacaccatcaagagacaggcaccatgctaaaacctctctccaggtgcct
ccatcacccaaatatagatattcaggtaggccaaaattatctggttcatcaacatcacta
ttaaatagcagacagcctactaaatccatttcctccagaacctcttctcaaatgccagaa
tacaaaaatccagctggaaatgtatcctttcttccatcatctcacccatttggagtggga
aaagaaaccttaaagaggaagaaaacagcctcacaagaaccccaacctgatgatcaaggc
ttactgactgaacctgtcccaggattcaatagggattcttcagtaaccaatttaccagaa
ggcaccacagatacagagaatactaatggagacaattttccaaaatacaaagagacaata
aataagactgtaccactgtaccatcgcatgtcacatatgggtacattccctcgccaacct
aatattggtccattccggtccaaccggaccagcacccctcagcacccctacagaagtctg
ctacgcagacccatcctgcccagagtcaacagcactgctaggaacaaagtggaacccgaa
atgattagcagcaacctaaacccaaaccatacactaaaatttacatggaaggggaaaaat
ggaacagtcatcagacttccaccaaaacttcttagtcgaataaaaacaaactttaaaaat
ggctccaaagctggtgtcacagtagacaaaaacacaagcaaagaatcaaatattgttttc
ccagcagataatgatgcagaccctaaatttaatctctccctgtcaacatataaggctcca
tcgaaaagcaatgatacaatacaaactgtcagcaggggttcagaaaacaccattgatcac
atcttacccagagtcacaaacagagacaacagcactacttggcacaccattccccatcac
caaagggtatctggagtcatcagtggcaggcaaaatgcttcaaatctgaagattagacca
acaattgtactgaaaaggaaaaataacacggtcatcagacttccatcaaaaccttatact
cgaataaatgtaaactcaaccaccatccatagtctgctcaaagatagtaagtatggaata
aggcacaaagactccaaagatgcaagcaaggaatctcaaattggcttgtcaaaagacacg
gacacaaacctatttgctaacatcactctgtcaacagaagctccaatgggaactaatgag
acattacaagccattaatggaggttcagaaaatgctattgatcacagaaacaaagaacac
aacctgcccagcatcactaacagagaccaggacctacccagggtcacacccagagaccat
gaactatcaaagactgcagtcagagaccatgacctgcccagagtcacaaacagagaccag
gacctacccagggttacatccagagatcaggaaatatcaaagattgcaaatagagaccaa
gacctacccagggtcacaagcagagatatcaacactactattccaatgcttattgatcaa
aaggttgaatctgaagtcgtaggtcaaagggaaaatgtcccaaatcagaaccatagaaca
aaaattatgctaagaagaaaagatggcacattagtcagaactcaaaaaaaacttcatact
caaataaaaccaaactctaccagcattcacagtgggctgaaagatgcagacaccaaagtt
gttaaaggcatcaaagaatcagttattctctcagacaaacctaaagctgaaagtcattat
aaacttcaaactgttgctgggggtttagaagttggcaatgataacactcttcccagcata
acaaacagagaccaggacttgtccagaatcacaaacagagatcaccacctgcccagggtc
acaaacaaagaccaggacctgcccagtgacataaacagagacaacagcactagtatgaaa
caagttatcaaagaattcaaagaatctacagaacctactgttcaagctgttgctgcaggt
tcagaaaatggcattgataacaacagcactactatgcaaatggaacctgaattcaacagt
catagcaaaaagggtccaacttccaattttacagcaacagttacaatgaaaaagaaaaat
gaaacagtcttcagaaacacaccaaagtttaaaataaagccaaactttcatggtgaccca
aaaccaagtaaagaaagcagcacttctaggcatacccttcctcataacaccttaaatcgc
agccctagaccaaaatctacacagcaaaggaaaaacggcacgatcatccgacccccgccg
aaagtttctcctcaactcaagccaaagtccaccacaattcttgatggcacaaaagggaga
aaacattccacagatgatcctaaacttgtttggtcgtcaaaggttcctctctcaacagat
aaggccacaagccaaacaaataccgcatttccaattgctgaggtttcagaagatagcatc
aatcaagttggagtccagaatgtgacatcaaagggatttatcataatttgggtggcacca
gagggaaggttcaaaaactttgtgatcagaataatagaagagaatgatgaaggggtaaat
gagggtgatggaagcaaccaggaaaaagaggaagagaggacagaaggaagtgaaataacc
actaatgttattgaggttgtgaggaggaacagcagcaatgatggggttagaaagaaattc
accaagttgcttcctggttctgctcgctcgtaccctgtcatagatctcaccgctcaaacc
aactactctgtgaccctttatggaacaggtcgtggattacgttccaatgttcacaccttc
atcattacaacaggtcctgagcctccctcacacctctcctttagtgaaataactgacacg
tcgctcactgtgtcatggagacgaccaaaaagctctgtgtctgggtttaaggtcacgtac
atacacactaaagaaggagagccgatctcggtgacggtggactcgtcaaactccaacctc
gctctgtccaagctctcccccggatccacttacgaggtcagcgtcatctctgtgctcgga
ttggacgagagcgacccaatcaaagacttcgtgatcacactgcccgacccgcccactgac
ctcagggccataaacatcacagataccaaggctctgttgctatggagacctgccctggca
accgtcgaccagtacatcatcacttaccactccgaggaagctcctggctcagacctgagt
gtcagagtgtcaggtaacgcagtggaacagcagcttcaggctctaaaggaatccaccaag
tacagcgtcaccatcatcagccgactcggagaacagaaaagctccagcacactcaccacc
ttcaccacgaccagcggctctcctggaaaaggggaggcacctcgggacctgatagccaaa
caggtaactgcacgttctgctgtgttgtcatggaaaccaccagcttcagccgtgacgagc
tacaaactgacgtacttcaccaagggtggagagcgcaaggaagtgacccttaaccctgga
gttactgaacacgagctgcgaaggctgcgtccctcgtctacgtatacggcactactgcag
ggtgaaagaggcggagtctacaccgcggccatctccacggagttcactacaggagctctg
cgcttcccgtacccctctgactgctcccaggagctgatgaatggacagaaggagtcaggt
ttggtggagattttccccggagggaaacagggacaacctgtcatggtttactgcgatatg
gagacggacggaggaggctggacggtcttccagagacgaaaagatgggaaaaccaacttc
ttcagaagctggcaggagtacaggaagggtttcggcgacctggagggagagttctggctc
ggaaacgacttcctccacaacctcactacgatgactcccatgaatctgagagtggacctg
aggtcaggagacgaggccgtctatgcgcactactccaccttctccctggacaccatgaag
aaacactacatgttgcgagtgtctggatattcgggcacagccggcgactctctgaagtac
cacgataagcggccgttctccacgttcgaccgcgacccccagcccttcatcacacgctgc
tccatgtcttacagagggggctggtggtacaagaactgccacgaggctaatctcaacggc
ctgtacaacacacacactaaccac
DBGET
integrated database retrieval system
